KEGG   Quillaja saponaria (soapbark tree): O6P43_021491
Entry
O6P43_021491      CDS       T09778                                 
Name
(GenBank) Pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_021491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsa03041]
    O6P43_021491
Spliceosome [BR:qsa03041]
 Complex C
  Other components
   Step II factors
    O6P43_021491
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_MABP1-WDR62_1st eIF2A WD_LRWD1 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_Vps41
Other DBs
NCBI-ProteinID: KAJ7954793
UniProt: A0AAD7PGJ2
LinkDB
Position
9
AA seq 593 aa
MDLLQSYSDRNDNHLDEPENQGEIPNSEANSSPDASPPRLLPAKSAAPKVDDTMLALTVA
QAHQTLTKPIDPVQHAVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDAAIE
PFVFDEQYNTFYKYGYAADPSASAGYNYVGDLEALQKNDGVSVYNIPQHEQKRRKLEKKK
ELEEDEVAGGDVDKVEIENPATDTWLLKNKKSPWSGKKEGLETELTDEQKKYAEEYAKKK
GEERSGFGGDKGEVVQDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSG
HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIWFCNDGTK
FLTAGYDKNIKYWDTETGQVISTFSTGKVPYVVRLNPDEDKQNVLLAGMSDKKIVQWDMN
TGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS
ISLHPNTNWLAAQSLDNQILIYSTREKFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSG
DGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggatcttctccagtcgtacagtgaccgaaacgacaaccatttggatgaaccagaaaac
cagggtgaaatccctaattcagaagcaaattcgtcaccggacgcatccccacctcgcctc
ctccctgccaaatccgctgctcccaaggtcgatgacaccatgctcgcacttacagtagct
caagcgcaccaaaccctgactaaacccatcgaccctgtccagcacgccgttgccttcaat
cccacttacgaccagctttgggctcctatctatggtccttcccacccttacgccaaggac
ggcatagcccaagggatgcgcaatcacaagttgggttttgttgaggatgccgctattgag
ccctttgtcttcgacgagcagtacaacactttttacaagtatggctacgctgctgacccc
tcggcttctgctgggtacaactatgttggcgatttggaagctttgcaaaagaatgatggg
gtttctgtgtacaacataccgcaacacgaacagaagaggaggaagttagagaagaagaaa
gaattggaggaagatgaagttgcgggtggagatgttgataaggtagagattgaaaatccg
gcgactgatacatggttgctgaagaacaagaagagtccgtggtcaggtaagaaagaaggg
ctggagacagaattgacagatgagcaaaagaagtatgctgaagaatatgctaagaagaag
ggagaagaaagaagtggctttggtggtgacaagggagaggttgtccaggataagagtact
tttcatggaaaggaagaaagggactatcagggtaggtcttggattgcacccccgaaggac
gcgaaggccaccaatgatcactgttatatacccaagaggttggttcatacctggagtggg
cacacgaagggtgtatctgcaattcggtttttcccaaagtacgggcatttgattctttct
gctggaatggatacaaaagtgaagatttgggatgtgttcaattcaggtaaatgtatgaga
acttacatgggccactcaaaggctgtacgtgatatttggttttgtaatgacgggactaag
tttttgactgctggttatgataagaatattaagtattgggatactgaaactggtcaagtg
atatcaactttctcaaccgggaaggtcccatacgtggttaggcttaatccggacgaggat
aagcagaacgttttattggcgggcatgagtgataaaaagattgttcaatgggacatgaat
acagggcagataacgcaagagtatgatcaacatttgggggctgtcaataccatcacattt
gttgataacaacaggagatttgttacttcaagtgatgacaagtctctccgtgtatgggaa
tttggtattcctgtggttataaagtatattagtgagccccacatgcactccatgccatct
atttctcttcatccaaatacaaattggcttgctgcacagagtttggacaatcagatactt
atctacagcacgagggagaagtttcagctcaataagaaaaagagatttgctgggcacatt
gcggctgggtatgcttgccaggtcaacttctcaccggatggacgatttgtcatgtctgga
gatggagaagggaagtgttggttctgggactggaagagttgcaaagtttttagaactctc
aagtgtcatgaaggcgtctgcattgggtgtgagtggcatcccttggaacagagtaaggta
gcaacatgtgggtgggatggcttgatcaaatactgggactag

DBGET integrated database retrieval system