Quillaja saponaria (soapbark tree): O6P43_022412
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Entry
O6P43_022412 CDS
T09778
Name
(GenBank) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03082
ATP-dependent chromatin remodeling
qsa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
O6P43_022412
03083 Polycomb repressive complex
O6P43_022412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_022412
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
O6P43_022412
Histone modification proteins
HAT complexes
HATB complex
O6P43_022412
HDAC complexes
Sin3A-HDAC complex
O6P43_022412
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
O6P43_022412
PRC2.2
O6P43_022412
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
O6P43_022412
Heterochromatin formation proteins
Other heterochromatin formation proteins
O6P43_022412
Chromatin remodeling factors
NuRD complex
O6P43_022412
NuRF complex
O6P43_022412
NuRF complex (fruit fly)
O6P43_022412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_RFWD3
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
KAJ7955889
UniProt:
A0AAD7PI85
LinkDB
All DBs
Position
9
Genome browser
AA seq
502 aa
AA seq
DB search
MESQQQGVVKKKETRGRKPKPKGDKKDEQGKMVKEGKKAQQHHTVDDKYSQWKSLVPVLY
DWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAA
AEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPN
RHAVLGATNSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHISSAATD
SAAPKSPGSGGSIIKQNTKPGDGSGKTADGPSVGPRGIYYGHEDTVEDVAFCPSSAQEFC
SVGDDSCLILWDARVGFSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNTVCMFDRRN
LTFDGVGSPIYRFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVERAGRT
PNASNASGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCDSTGGGGTLQIWRMSDLLYR
PEEEVLAELEDFKSHVVACSKP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcagcagcaaggtgtggtgaagaagaaagagacgaggggtcgaaagccgaag
ccaaagggtgacaagaaagatgaacaagggaagatggtgaaggaagggaagaaagcacaa
caacatcacactgtggacgacaagtactcccaatggaagtcacttgtccctgttctttac
gactggctcgcaaatcacaaccttgtttggccttctctctcttgccgatggggtcctcag
cttgagcaagctacttacaaaaatcgccagcgcctctacctctccgaacagactgatggc
agtgttccaaatacgctggtcattgcaaactgtgaagttgtcaaacctagggttgctgct
gcggagcacatttctcagttcaatgaagaggcacgctctccatttgtaaagaaatacaag
accatcatacatccaggagaggtgaacagaatcagagaactcccacagaatagtaagata
gtggcaactcatactgatagtcctgatgttcttatttgggatgttgaagctcaacctaac
cgtcatgctgtccttggggctacaaattctcatccagatctgatattgactggacatcaa
gataatgcggaatttgctcttgcaatgtgcccaactgaaccctatgttctttctggaggg
aaggacaagtcagtggttttgtggagtatacaggaccacatatcttctgctgccacggac
tcagccgcacccaagtcccctggatctggtgggtcaatcataaaacagaacactaaacct
ggggatggcagtggtaaaactgctgatggtccatctgtcggaccacgaggtatttactat
gggcatgaggatacagtcgaagatgtggctttctgtccttccagtgcacaggagttctgc
agcgtgggtgatgattcttgcctaatattatgggatgcacgtgttggctttagtcccgtt
gttaaggttgaaaaggcacatgatgctgatcttcactgtgttgattggaatccacatgat
gacaatcttattctaactgggtcggcagataatacagtttgcatgtttgatcgccggaat
ctcacatttgatggagtggggtcacctatttatagatttgagggtcacaaagctgctgtt
ctttgtgttcagtggtccccagacaaatcttctgtatttggaagttcagcggaggatggt
ctgctgaatatttgggattatgagaaggttggcaaaaaggtagagcgagcaggaagaacc
ccaaatgcttcaaatgcttctgggttgtttttccaacatgctgggcacagggataaagtt
gttgacttccactggaatgcatctgatccctggactattgttagtgtgtcagatgactgt
gactctactggtggtggggggaccttgcagatatggcgcatgagtgatttgctctacaga
cctgaagaagaggttctggcggagcttgaggacttcaagtcacacgtggtagcttgttca
aagccttga
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