KEGG   Quillaja saponaria (soapbark tree): O6P43_022445
Entry
O6P43_022445      CDS       T09778                                 
Name
(GenBank) WD repeat-containing protein
  KO
K12602  WD repeat-containing protein 61
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O6P43_022445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_022445
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     O6P43_022445
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_Gbeta ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Vps41 WDR90_beta-prop_4th eIF2A WD40_RFWD3 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IFT140_1st Cytochrom_D1 Beta-prop_HPS5 Ge1_WD40 CFAP43_N WDR54 Beta-prop_WDR11_1st Beta-prop_ACSF4 BBS2_Mid Beta-prop_WDR11_2nd Tricorn_2nd Beta-prop_pof12 KNTC1_N DUF2415
Other DBs
NCBI-ProteinID: KAJ7955934
UniProt: A0AAD7PIA1
LinkDB
Position
9
AA seq 324 aa
MKLAGLKSIENAHDESVWAVTWVPATETRPPLLLTGSLDETVRLWKSDDLVLERTNTGHC
LGVASVAAHPLGRIAASSSLDSFVRVFDVDSNATIATLEAPPSEVWQMKFDPKGNILAVA
GGGSASVKLWDTNSWQHVATLSIPRPEASQATKPIDKSGSKKFVLSVSWSLDGRRIACGS
MDGTISVFDVARAKFLHHLEGHYMPVRSLAYSPSEPRLLFSASDDGHVHMYDAEAKTLVG
SMSGHASWVLSVDVSPDGAALATGSSDRTVRLWDLSMRAAVQTMSNHADQVWGVAFRPPG
GTDTRAGRLASVSDDKSISLYDYS
NT seq 975 nt   +upstreamnt  +downstreamnt
atgaaactcgcaggactaaaatccatagagaatgcgcatgacgagtctgtgtgggctgtc
acatgggtacccgccactgaaacccgaccacccctccttctcactggctcccttgacgag
acggtgaggttatggaagtccgacgaccttgttcttgaacgaaccaacactggccactgc
cttggagttgcgtccgtagcagctcacccacttggtagaattgccgcttcctcttctctg
gatagctttgttcgggtcttcgatgttgattccaatgctactattgctaccctcgaagct
cctccttctgaagtctggcaaatgaagttcgaccctaagggtaacattcttgctgttgct
ggtggaggcagtgcatcagtcaagctttgggacactaactcatggcaacatgttgccact
ttatcaattcctaggccagaagcaagtcaagcaaccaagcctattgataaaagtggcagc
aagaagtttgtcttatcagtttcgtggagtctcgatgggagacgaattgcatgcggctcg
atggacggtacaatttctgtttttgatgtcgctcgtgccaaatttttacaccacttagaa
ggccattacatgcctgtgcgatctcttgcgtattccccttcagagccacggctactcttt
tcagcatcagatgatggtcatgtacacatgtatgatgctgaggcaaaaaccctagttggg
tctatgtcaggtcatgctagctgggtattgagcgtggatgtaagcccagatggggcagct
cttgcaacaggctcaagtgacagaactgttaggctttgggatcttagcatgagggcggcc
gtgcagacaatgagcaaccatgcagaccaggtgtggggtgtggcattcagaccaccagga
gggactgatacaagagctggccgccttgctagtgtatcagatgacaagagcatatcgtta
tatgattattcctga

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