Quillaja saponaria (soapbark tree): O6P43_022445
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Entry
O6P43_022445 CDS
T09778
Name
(GenBank) WD repeat-containing protein
KO
K12602
WD repeat-containing protein 61
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_022445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_022445
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
O6P43_022445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Cytochrom_D1
Beta-prop_HPS5
Ge1_WD40
CFAP43_N
WDR54
Beta-prop_WDR11_1st
Beta-prop_ACSF4
BBS2_Mid
Beta-prop_WDR11_2nd
Tricorn_2nd
Beta-prop_pof12
KNTC1_N
DUF2415
Motif
Other DBs
NCBI-ProteinID:
KAJ7955934
UniProt:
A0AAD7PIA1
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All DBs
Position
9
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AA seq
324 aa
AA seq
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MKLAGLKSIENAHDESVWAVTWVPATETRPPLLLTGSLDETVRLWKSDDLVLERTNTGHC
LGVASVAAHPLGRIAASSSLDSFVRVFDVDSNATIATLEAPPSEVWQMKFDPKGNILAVA
GGGSASVKLWDTNSWQHVATLSIPRPEASQATKPIDKSGSKKFVLSVSWSLDGRRIACGS
MDGTISVFDVARAKFLHHLEGHYMPVRSLAYSPSEPRLLFSASDDGHVHMYDAEAKTLVG
SMSGHASWVLSVDVSPDGAALATGSSDRTVRLWDLSMRAAVQTMSNHADQVWGVAFRPPG
GTDTRAGRLASVSDDKSISLYDYS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcaggactaaaatccatagagaatgcgcatgacgagtctgtgtgggctgtc
acatgggtacccgccactgaaacccgaccacccctccttctcactggctcccttgacgag
acggtgaggttatggaagtccgacgaccttgttcttgaacgaaccaacactggccactgc
cttggagttgcgtccgtagcagctcacccacttggtagaattgccgcttcctcttctctg
gatagctttgttcgggtcttcgatgttgattccaatgctactattgctaccctcgaagct
cctccttctgaagtctggcaaatgaagttcgaccctaagggtaacattcttgctgttgct
ggtggaggcagtgcatcagtcaagctttgggacactaactcatggcaacatgttgccact
ttatcaattcctaggccagaagcaagtcaagcaaccaagcctattgataaaagtggcagc
aagaagtttgtcttatcagtttcgtggagtctcgatgggagacgaattgcatgcggctcg
atggacggtacaatttctgtttttgatgtcgctcgtgccaaatttttacaccacttagaa
ggccattacatgcctgtgcgatctcttgcgtattccccttcagagccacggctactcttt
tcagcatcagatgatggtcatgtacacatgtatgatgctgaggcaaaaaccctagttggg
tctatgtcaggtcatgctagctgggtattgagcgtggatgtaagcccagatggggcagct
cttgcaacaggctcaagtgacagaactgttaggctttgggatcttagcatgagggcggcc
gtgcagacaatgagcaaccatgcagaccaggtgtggggtgtggcattcagaccaccagga
gggactgatacaagagctggccgccttgctagtgtatcagatgacaagagcatatcgtta
tatgattattcctga
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