Quillaja saponaria (soapbark tree): O6P43_022468
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Entry
O6P43_022468 CDS
T09778
Name
(GenBank) Replication protein A subunit
KO
K07466
replication factor A1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03030
DNA replication
qsa03420
Nucleotide excision repair
qsa03430
Mismatch repair
qsa03440
Homologous recombination
qsa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O6P43_022468
03420 Nucleotide excision repair
O6P43_022468
03430 Mismatch repair
O6P43_022468
03440 Homologous recombination
O6P43_022468
03460 Fanconi anemia pathway
O6P43_022468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qsa03000
]
O6P43_022468
03032 DNA replication proteins [BR:
qsa03032
]
O6P43_022468
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_022468
Transcription factors [BR:
qsa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
O6P43_022468
DNA replication proteins [BR:
qsa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
O6P43_022468
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
O6P43_022468
MMR (mismatch excision repair)
O6P43_022468
DSBR (double strand breaks repair)
HR (homologous recombination)
O6P43_022468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-ProteinID:
KAJ7955960
UniProt:
A0AAD7LF20
LinkDB
All DBs
Position
9
Genome browser
AA seq
598 aa
AA seq
DB search
MSVNLTPNAIPAIIAGDLNSKPLVQAMLATQLNDRVRTGRVKKGSVVQLIEYIRSPVQNR
KIIVVLNMETIISDCEIIGNPNLFAESDLTACKTLPNSDSLVSARVSSNNHLTSKTLGHN
EQNFRPTVQPPYQPLPNYQNRGAIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRR
YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAIEVGKVYLISKGSLKPAQQNFN
HLKNEWEIFLEITSTVDPCPDEDGSIPKQQFSFRPISDIETVDNNSILDVIGIVISVNPS
VPILRKNGMETQRRILNLKDRSGRSVELTLWGEFCNREGQKLQEMIDSGIFPVLAVKAGK
VNDFSGKSIGTISATQLFINPEFPEAHGLRDWFDRGGKNVASLSISREVMAGGPKNEIRK
TVSQIKDEGLGRSDKPDWVTVRSTISFIKTDTFCYTACPLMIGDRQCNKKVTRSANMRWQ
CDRCNQEFEECDYRYLLQAQIQDLTGLTWVTAFQESGEEILGCSAKDLYLLKYEEQNDER
FAEIIRTRLFNQFLFRLKIKEELYGDEQRVKITVVKADKVNYSSESRYMLDMISKFSR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaatctcacgccgaacgcgatcccggcgataattgccggcgatttgaactcg
aagcctctcgttcaggccatgcttgcaactcagcttaacgaccgagtccggaccggacga
gttaagaaaggttctgtggttcagttgatcgagtatatccgtagccctgttcagaatcgc
aagattattgtagtgctgaacatggaaactataatatcagactgtgagataattgggaat
ccaaatttgtttgctgaatctgatttgacagcttgtaagacattacctaatagcgattct
ctggtctcagccagggttagtagtaataatcatttgacttccaaaactctgggtcataat
gagcagaatttccgaccaactgttcaacctccataccaaccacttccaaattaccaaaat
cgtggtgcaattatgaagaatgaggcaccggcacgcatcattcctatagctgcattaaat
ccttatcaagggcggtgggctatcaaggcaagagtaactgcaaaaggtgatcttcgccga
tacaataatgcccggggagatgggaaagtattctctttcgacctccttgactctgatgga
ggggaaatacgagtgacttgcttcaatgctgttgttgatcgtttctatgatgctattgaa
gttggtaaagtttatttgatttcaaagggtagcttaaaacctgcccagcagaacttcaac
catttgaagaatgaatgggagatttttttggaaatcacttcaacagtggatccttgccca
gatgaagatggttctatacctaaacagcagttctcctttaggcctatcagtgatattgag
actgttgataataactccatacttgatgttattggtattgtgatatctgtgaacccatca
gttccaatcttgagaaagaacggcatggaaactcagagaagaattttgaatctgaaggac
aggtctggcaggagtgtcgagctaaccctatggggggaattctgcaacagggaaggtcaa
aagctacaagagatgattgattccgggatttttcctgttttagctgtcaaagctgggaaa
gttaatgatttcagtggaaaatctatagggacaatttctgctacccagctgttcataaac
ccagagttccctgaggctcatggcttaagagactggtttgatcgaggtggaaagaatgtt
gcttctttatccatttcaagggaagttatggcaggaggacctaagaatgagatacgtaaa
actgtgtctcagatcaaagatgaaggtcttggaaggtctgataagccagactgggtcaca
gtgaggtctaccatatctttcattaagacagatactttttgttacacagcttgcccattg
atgattggagatcgacaatgtaataagaaagtgacaaggtctgcaaacatgagatggcaa
tgtgacaggtgcaatcaagagtttgaggagtgtgattatagataccttcttcaagcccaa
attcaagatcttactggattgacttgggtgactgccttccaggaatcaggggaagagatc
ttaggttgctcagcaaaggatctgtacttgttgaaatatgaagagcagaatgacgagagg
tttgcagaaattattcggactagactctttaaccaattcctgtttaggctgaaaatcaag
gaggaactttatggtgatgaacagagagtgaagatcactgtggtcaaggcagataaggtg
aattattcttcagagagtagatatatgcttgatatgatttcaaagttttctaggtaa
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