KEGG   Quillaja saponaria (soapbark tree): O6P43_022468
Entry
O6P43_022468      CDS       T09778                                 
Name
(GenBank) Replication protein A subunit
  KO
K07466  replication factor A1
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03030  DNA replication
qsa03420  Nucleotide excision repair
qsa03430  Mismatch repair
qsa03440  Homologous recombination
qsa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    O6P43_022468
   03420 Nucleotide excision repair
    O6P43_022468
   03430 Mismatch repair
    O6P43_022468
   03440 Homologous recombination
    O6P43_022468
   03460 Fanconi anemia pathway
    O6P43_022468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:qsa03000]
    O6P43_022468
   03032 DNA replication proteins [BR:qsa03032]
    O6P43_022468
   03400 DNA repair and recombination proteins [BR:qsa03400]
    O6P43_022468
Transcription factors [BR:qsa03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    O6P43_022468
DNA replication proteins [BR:qsa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    O6P43_022468
DNA repair and recombination proteins [BR:qsa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     O6P43_022468
   MMR (mismatch excision repair)
     O6P43_022468
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     O6P43_022468
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223
Other DBs
NCBI-ProteinID: KAJ7955960
UniProt: A0AAD7LF20
LinkDB
Position
9
AA seq 598 aa
MSVNLTPNAIPAIIAGDLNSKPLVQAMLATQLNDRVRTGRVKKGSVVQLIEYIRSPVQNR
KIIVVLNMETIISDCEIIGNPNLFAESDLTACKTLPNSDSLVSARVSSNNHLTSKTLGHN
EQNFRPTVQPPYQPLPNYQNRGAIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRR
YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAIEVGKVYLISKGSLKPAQQNFN
HLKNEWEIFLEITSTVDPCPDEDGSIPKQQFSFRPISDIETVDNNSILDVIGIVISVNPS
VPILRKNGMETQRRILNLKDRSGRSVELTLWGEFCNREGQKLQEMIDSGIFPVLAVKAGK
VNDFSGKSIGTISATQLFINPEFPEAHGLRDWFDRGGKNVASLSISREVMAGGPKNEIRK
TVSQIKDEGLGRSDKPDWVTVRSTISFIKTDTFCYTACPLMIGDRQCNKKVTRSANMRWQ
CDRCNQEFEECDYRYLLQAQIQDLTGLTWVTAFQESGEEILGCSAKDLYLLKYEEQNDER
FAEIIRTRLFNQFLFRLKIKEELYGDEQRVKITVVKADKVNYSSESRYMLDMISKFSR
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgtcggtgaatctcacgccgaacgcgatcccggcgataattgccggcgatttgaactcg
aagcctctcgttcaggccatgcttgcaactcagcttaacgaccgagtccggaccggacga
gttaagaaaggttctgtggttcagttgatcgagtatatccgtagccctgttcagaatcgc
aagattattgtagtgctgaacatggaaactataatatcagactgtgagataattgggaat
ccaaatttgtttgctgaatctgatttgacagcttgtaagacattacctaatagcgattct
ctggtctcagccagggttagtagtaataatcatttgacttccaaaactctgggtcataat
gagcagaatttccgaccaactgttcaacctccataccaaccacttccaaattaccaaaat
cgtggtgcaattatgaagaatgaggcaccggcacgcatcattcctatagctgcattaaat
ccttatcaagggcggtgggctatcaaggcaagagtaactgcaaaaggtgatcttcgccga
tacaataatgcccggggagatgggaaagtattctctttcgacctccttgactctgatgga
ggggaaatacgagtgacttgcttcaatgctgttgttgatcgtttctatgatgctattgaa
gttggtaaagtttatttgatttcaaagggtagcttaaaacctgcccagcagaacttcaac
catttgaagaatgaatgggagatttttttggaaatcacttcaacagtggatccttgccca
gatgaagatggttctatacctaaacagcagttctcctttaggcctatcagtgatattgag
actgttgataataactccatacttgatgttattggtattgtgatatctgtgaacccatca
gttccaatcttgagaaagaacggcatggaaactcagagaagaattttgaatctgaaggac
aggtctggcaggagtgtcgagctaaccctatggggggaattctgcaacagggaaggtcaa
aagctacaagagatgattgattccgggatttttcctgttttagctgtcaaagctgggaaa
gttaatgatttcagtggaaaatctatagggacaatttctgctacccagctgttcataaac
ccagagttccctgaggctcatggcttaagagactggtttgatcgaggtggaaagaatgtt
gcttctttatccatttcaagggaagttatggcaggaggacctaagaatgagatacgtaaa
actgtgtctcagatcaaagatgaaggtcttggaaggtctgataagccagactgggtcaca
gtgaggtctaccatatctttcattaagacagatactttttgttacacagcttgcccattg
atgattggagatcgacaatgtaataagaaagtgacaaggtctgcaaacatgagatggcaa
tgtgacaggtgcaatcaagagtttgaggagtgtgattatagataccttcttcaagcccaa
attcaagatcttactggattgacttgggtgactgccttccaggaatcaggggaagagatc
ttaggttgctcagcaaaggatctgtacttgttgaaatatgaagagcagaatgacgagagg
tttgcagaaattattcggactagactctttaaccaattcctgtttaggctgaaaatcaag
gaggaactttatggtgatgaacagagagtgaagatcactgtggtcaaggcagataaggtg
aattattcttcagagagtagatatatgcttgatatgatttcaaagttttctaggtaa

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