Quillaja saponaria (soapbark tree): O6P43_022985
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Entry
O6P43_022985 CDS
T09778
Name
(GenBank) RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_022985
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_022985
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_022985
Spliceosome [BR:
qsa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
O6P43_022985
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
90S particles
Helicases
O6P43_022985
Pre-60S particles
O6P43_022985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
KAJ7956562
UniProt:
A0AAD7PIM3
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All DBs
Position
9:10753489..10760713
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AA seq
598 aa
AA seq
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MAETEDNPHTLTEEEAKKKKRKRNRPKNKVAGLNEVAGPEEGDKVGGEMGDGTAESVELQ
KRKKKKKTMKVKGEEVEDGGDDDGKLKKEEKEDEQKRKKVKSGGFGIMGTESFTSLGLSE
PTLKAIEDMNFEYMTQIQERAIPPLLLGKDVLGAARTGSGKTLAFLIPAVELLYNIGFTP
RNGTGIVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGAARRGEAERLVKGVNLLVGT
PGRLLDHLQNTKGFIYKSLKCLIIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQT
KKVEDLARLSFQTTPVYIDVDYGRSKVTNEGLQQGYCIIPSEKRFVLLFTFLKKNLSKKV
MVFFSSCNSVKFHGELLRFINVDCLDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARG
LDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKEAKVPV
KEYAYDVKKLINIKSHLEKLVEGNYHLNQSAKEAYRSYILAYNSHSMKDIFNVHRLDLQA
VAASFCFSKPPKVNLNIDSNASKFRKKPRRIEGSRHGFTESNPYGQQRSADKGQFVRH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaactgaagacaaccctcataccttgactgaggaggaagccaagaagaagaaa
cgcaaaaggaacagacccaagaataaggttgcaggattaaacgaggttgcaggaccagag
gaaggtgacaaagtaggaggggaaatgggtgatgggacagcagaatctgtggagctgcag
aaaaggaagaagaagaagaagacgatgaaggtaaagggtgaggaagtagaagacggcggt
gatgatgatgggaagctgaagaaggaggagaaagaggacgagcagaagaggaagaaggta
aagagtggtgggtttggcattatgggcactgagtcttttacttctctgggattatctgag
cctactctcaaggctattgaggatatgaattttgagtatatgactcagattcaagaaaga
gcgattccaccacttttgcttggaaaagatgttcttggagctgccaggacaggttctgga
aaaacccttgctttcctcatacctgctgtagagctgttatataacattggttttactcct
cgcaatggaacgggtattgttgtcatttgcccaacaagggagcttgcaatacagactcat
gccgtggcgaaggaccttctgaagtatcactcccagacacttggcttggttattggtggt
gcagctagaagaggagaagctgaaagacttgttaaaggagtaaatctattagtaggaact
cctggtcgtcttcttgaccatcttcaaaataccaagggatttatatataaaagcttgaag
tgcctcataattgatgaagctgacaggatattggaagcaaactttgaggaagaaatgaag
caaattattaagatcctaccaaagaatagacaaacagctttattttcagctacccagacc
aagaaggttgaggatctcgcacgcttgtcatttcagacaactcctgtctatattgatgtt
gattatggtagatctaaggttaccaatgaaggactacagcaaggttactgcattatcccc
agtgaaaagcgatttgttcttttatttacctttttgaagaagaatctctcgaaaaaagtg
atggtctttttctcttcatgtaactcggtcaaattccatggagagcttctcaggttcatt
aatgtggattgccttgatatacatggaaagcaaaagcagcagaaacggacaactacattt
tttgatttctgcaaagcagaaaaggggatcttgctgtgtactgatgttgctgcccgtgga
cttgacatacctgccgttgattggattgtgcagtatgatcctcctgacgaacccaaggaa
tatattcatagagttggtcgaacagctcgtggggaaggtggaaaaggaaatgctctgctt
ttcttgattcctgaggagttgcaatttcttcgctatttgaaggaagcaaaggttcctgtt
aaggagtacgcgtatgatgtaaagaagctcataaacataaagtctcacctggagaagttg
gtggaaggcaattatcatctgaaccagtcagccaaagaggcatatagatcatacatatta
gcgtataattcacattcaatgaaggacatcttcaacgttcaccgccttgatttgcaggct
gttgcagcttcattttgcttctcgaaaccaccgaaggtgaatctgaacatagatagcaat
gcttcgaagtttaggaagaaaccacgtagaattgagggaagcagacatggatttacagag
agcaatccctatggacagcagagaagtgcagataaaggacaatttgtgaggcattaa
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