Quillaja saponaria (soapbark tree): O6P43_023001
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Entry
O6P43_023001 CDS
T09778
Name
(GenBank) putative DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
O6P43_023001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_023001
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
O6P43_023001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
DUF7006
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
KAJ7956581
UniProt:
A0AAD7LFT1
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All DBs
Position
9
Genome browser
AA seq
942 aa
AA seq
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MAENLEEQNKLPELKLDAKQAQGFLSFFKTLPHDSRAIRLFDRRDYYTAHGDNAAFIANV
YYRTTTALRQLGSGSVGLSSVSVNKSMFETIARDLLLERTDHTLEVYEGGGSNWRLVKSG
TPGNIGSFEDVLFANREMQDSPVVVALSPNFRENGCTIGLGYVDLTRRILGMSEFLDDSH
FTNLESALVALGCKECLLPIESGKSNETRTLHDALTRCGVMLTERKKTEFKTRDLVQDLG
RLVKGSIEPVRDLVSGFEFAPAALGALLSYAELLADESNYSNYSLRRYNLDCYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHTWLKQPLLDIDEINSRLDMVQTF
VDDTVLRQDLRQHLKRISDIERLVRNLEKRRASLQHIVKLYQSCVRLPYIRSALERYDGQ
FFPMVKGKYLDPLESWTDDDHLNKFIALVETSVDLDQLENGEYMISPSYDPALSALKEEQ
ESLERQIHNLHKQTANDLDLPLDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKRLGDQYQKILEEYKNCQKELVNRVVQTAATFSEIFDSLAGLLSELD
VLLSFADLASSCPTPYTRPEITPSDKGDLILEGSRHPCVEAQDWVNFIPNDCKLDRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCNKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLVIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALANENVNHDPQTKQLVGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPTAIYSNDAAKEVCPKRKRVFEPDDMSRGAARARQF
LEAFSALPIESMDKMQALQQVRKLKDDLEKDAENCSWLQQFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatttggaggagcagaataagctgcctgagctcaaattagatgctaagcaa
gcacaaggatttctctcgttcttcaaaaccctaccccatgattcaagggccattcgcctc
tttgatcgccgggactactatacagctcatggggataatgcagctttcattgctaatgtc
tactaccgtactaccactgctttgcgacaactggggagcggatctgttggcctttccagt
gtgagtgtcaataaaagtatgtttgaaacaatagctcgtgatcttctcctagagagaaca
gaccatactcttgaggtctacgagggtggtggctcaaactggagacttgtcaaaagtgga
actcctggaaatattggcagttttgaagatgttttatttgctaacagagaaatgcaagac
tctcctgttgttgttgcactatcacctaactttcgtgaaaatgggtgtaccattgggtta
ggatatgttgatctaactaggaggatacttggaatgtctgaatttcttgatgatagccac
ttcacaaatttggagtcagctttggttgctcttggttgcaaggagtgccttctgcctatt
gagagtggcaaatctaatgaaactagaactttgcatgatgcgttgactagatgcggtgtg
atgttaactgagagaaagaaaactgagtttaaaacaagggatctggtacaggatcttggc
aggcttgttaaaggttctattgaacctgttcgagatttagtatctggctttgagtttgca
cctgctgctctgggagcattactgtcttatgcagaattactagcagatgagagcaattat
agtaattattctcttcgaagatacaaccttgactgttacatgaggctagattctgcagct
atgagggcactcaatgtcttagaaagcaaaactgacgcaaacaaaaatttcagtttgttt
ggtctcatgaatagaacttgcactgctggaatggggaaaaggttactgcacacgtggcta
aaacagcctttattggacatagatgaaatcaattccaggctggatatggtgcaaacattt
gtggatgatacggtgcttcgccaagatctgaggcagcatcttaaacgaatatcagatatt
gagagactggtccgcaatcttgagaagcgaagagctagtttgcagcatattgtaaaactt
tatcagtcatgtgtccgactaccttacatcagaagtgccttggagagatatgatggacaa
ttcttcccaatggtcaaggggaagtacttggatccccttgagtcatggactgatgatgat
cacttgaataagttcattgctcttgtagaaacttctgttgatcttgatcaacttgagaat
ggggaatacatgatttcacctagttatgaccctgcactatctgctctgaaagaggagcag
gagtccctggagcgccaaatacacaatttgcataaacaaactgctaacgatcttgatctt
cctttagataaggcgttaaagttagataagggcacacaatttggacatgtttttcgaatt
acaaaaaaggaagagccaaaaataaggaaaaagctcaccacacaatttattgtacttgaa
acacgaaaagacggagtcaaatttaccaacacaaagcttaaaagactgggagaccaatat
caaaagattcttgaggagtacaagaattgtcagaaagagctcgtaaatcgagtagtgcaa
actgcagcaaccttttctgagatctttgactctttagctggattactttctgagttggat
gtcttactaagttttgctgatttggcttctagttgtcctactccatacacaaggcctgaa
atcactccatcggataaaggagatcttattttagaaggcagtagacacccttgtgtggag
gctcaagactgggtgaattttataccaaatgattgtaagcttgacagaggaaaaagttgg
tttcaaatcataacagggcctaacatgggtgggaaatccacatttattcggcaggttggt
gtgaatattttgatggcacaagttggttcatttgttccttgtaacaaagccagcatatct
gttcgtgattgcatttttgctcgtgtaggggctggtgactgccagcttcggggagtttct
acctttatgcaagaaatgctcgaaactgcatcaatattaaaaggtgctacggacaagtca
ttggtaattattgatgagttgggccgtgggacatcgacgtatgatggatttggtctcgct
tgggccatttgtgagcaccttgttgaagtgattaaagcacctactttgtttgcaacccac
tttcacgaactgactgcattggccaatgaaaatgtcaaccatgatccacaaacaaagcaa
cttgttggtgtggcaaactatcatgtcagtgcacacattgattcatcaagtcgcaagctg
acgatgctgtacaaggttgaaccaggagcttgtgatcaaagttttggtattcatgttgct
gaatttgcgaactttcctgaaagtgttgttgcccttgctagagaaaaggctgccgagttg
gaagatttctctcctacagcaatctactcaaatgatgctgcaaaagaggtgtgtcctaaa
cgtaagagagtatttgaacctgatgatatgtccagaggtgccgcaagggcacgccagttt
cttgaagctttttctgccttgccaatagaatcaatggataaaatgcaggctcttcaacaa
gtaagaaaattgaaggatgatttagagaaggatgcagaaaactgttcctggctccagcaa
ttcttctag
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