Quillaja saponaria (soapbark tree): O6P43_023249
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Entry
O6P43_023249 CDS
T09778
Name
(GenBank) Apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03013
Nucleocytoplasmic transport
qsa03015
mRNA surveillance pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_023249
09122 Translation
03013 Nucleocytoplasmic transport
O6P43_023249
03015 mRNA surveillance pathway
O6P43_023249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_023249
03041 Spliceosome [BR:
qsa03041
]
O6P43_023249
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
O6P43_023249
Spliceosome [BR:
qsa03041
]
Complex C
Other components
EJC/TREX
O6P43_023249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-ProteinID:
KAJ7956874
UniProt:
A0AAD7LEW1
LinkDB
All DBs
Position
9
Genome browser
AA seq
737 aa
AA seq
DB search
MSSRYPVLDNRPIDQWKVIELKEELRRRKLTTKGLKDDLIKRLDEALRIQREAAEKESTN
GFDCDPQSVAGAEDAETVPVVTETVDKVRRENTEIVGSIKKDKAETIEKYNAESIKDVVG
QDSSKNEPIGDVTAQVDINKSATPMEQEKVEQKDLPSGTDSVGVGEELVAHRTSVETSIT
ITETVLSEIVFSGQDSQDMVTEKNEDSTAKLENEAPTARLDNEDSIIKLQNQDSKTKLEN
EDSKPWVENEDSKHQMGCDTKPLCEDVLPGSSVPENQVSEVNPILGSQVKSDSISTDSVS
INEKIELKDNIIADNVKLEQDILRPEMVEPSSSNIVPVFGDSHPMDVEEADEKKASVEEK
DVNNSTSPDLNKTNNSEDVGYPEKLNLDRSSGDDSMEEDLVETKQFDSKDNSDDLRDGGV
REVPITNVEIGTNVVGDGFSVGNTDIHVDNNIHPIVSAEKRKFHDQVAVGNNEPSKRRRW
NSETVKVPDPQNSNLTHSTTPKDKPATPPAFKRNFFRSESSVSDDATKERVVPPSQQPPT
NSLRIDHFRRPLTLKAVQELLGKTGCVISFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQ
WPPNGGRLLVAEFVDSEEVKMKLEPPPTQAVPVKSGPTVPPAPIMVQPEPSPRQQRQQLP
PPPNLPPPPPLFNHPPAARERLPSPPPLPEQVDPPIMTLDDLFRKTKATPRIYYLPLSEE
QVAAKLALKGSAVTSRD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagatatccagtactcgacaatcgaccaattgatcagtggaaggttatagaa
ttaaaggaggagctgaggagaagaaaactgacaacgaaaggtttgaaggatgatttgatt
aagcgtttagacgaagcccttcgcattcaaagggaggcagctgagaaggaatcaactaat
ggttttgattgtgatccccaatctgtagctggggcagaagatgcagagacagttcccgta
gtcactgaaacagttgataaagttcgaagggaaaatactgaaatagttggaagtattaaa
aaggataaagctgaaaccattgaaaagtataatgccgaatcaattaaagatgttgtgggt
caagactctagcaagaatgagccgatcggtgatgttactgcccaggttgacatcaataag
agtgcgacacccatggagcaagaaaaagttgaacaaaaggacttgccaagtggtacagat
tctgttggtgtgggtgaggagctggttgctcatcgtacttctgtggaaaccagcattaca
atcaccgagactgtgttgtcagaaattgtattcagtggtcaagattcccaggacatggta
accgagaagaacgaagactcaacagctaagcttgaaaatgaggctccaacagctaggctt
gataatgaggattcaattattaagcttcaaaatcaggattcaaaaactaagcttgaaaat
gaggattcaaagccctgggtggagaatgaggattcaaagcatcaaatggggtgtgataca
aagcctctgtgcgaggatgtcttgcccggctcatctgttccagaaaaccaggtatctgag
gtcaaccctattttagggtctcaagtaaaatctgattctatatctactgattctgtgtca
attaatgaaaagattgaactaaaggataatataattgctgataatgtcaaattagaacaa
gatattcttaggcccgagatggtggaaccatcatccagcaatattgtcccagtttttggt
gattctcatccaatggatgtcgaagaggcagatgagaaaaaggcctctgttgaagaaaaa
gatgttaacaattctaccagtccagacttgaacaagacaaataatagtgaagacgtggga
tatccagaaaagttaaatctggacagaagttctggtgatgattctatggaagaggacttg
gtggagactaagcagtttgattcgaaggataattcagatgatcttagagacggtggggtg
agggaagtgcctattacgaatgtggaaattggtactaatgttgtgggagatggtttttca
gtaggaaacactgatattcatgttgacaacaatattcatcctattgtatctgctgaaaaa
agaaaatttcatgatcaagtagcagttgggaacaatgagccctcaaagaggcgtaggtgg
aattctgaaactgttaaagttccagatccgcaaaactctaatcttactcatagtactaca
cccaaggataagccagctactccgcctgctttcaaacgcaacttctttagatctgagtcc
tcagtgagtgatgatgctactaaggaacgtgttgttccaccatcacaacaacctcctact
aattccctcagaattgatcactttcggcgtccccttaccctgaaagcagttcaagaactt
ctgggtaaaactgggtgtgtcatcagtttctggatggatcaaatcaagacgcattgctat
gttacttactcatcagttgaagaggccattgagacacggaatgctgtgtataacttacaa
tggcctccaaatggtggtcgcctcctagttgctgaatttgttgattcagaagaagtgaaa
atgaagctagagcctcctcctactcaggcagtgcctgtaaagagtggtcctacagttcct
cctgcaccaatcatggtgcagcctgaaccatctccccgtcaacaaaggcaacagcttcca
cctccacctaatctaccacctccaccgcctttgtttaaccacccaccagctgcaagggaa
cgactcccatcccctccaccccttcctgagcaggttgatcctcctatcatgacactggat
gatctcttccgcaaaaccaaagcaactcctaggatctactacttacctttgtcagaagaa
caagttgcagcaaaacttgcattgaagggcagcgctgtgactagtagggattag
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