Quillaja saponaria (soapbark tree): O6P43_023316
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Entry
O6P43_023316 CDS
T09778
Name
(GenBank) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_023316
Spliceosome [BR:
qsa03041
]
Common components
Common spliceosomal components
General mRNP proteins
O6P43_023316
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-ProteinID:
KAJ7956952
UniProt:
A0AAD7PIZ9
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All DBs
Position
9
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AA seq
552 aa
AA seq
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MEFDEYDYLEKTVEEQEDRDSTKKKKEGSEKSERAYRKREVDEDVDGEDRKSKRSRGDDD
RERDRSGREKDRHRSVRDRDGDRERERDRERSSREKDRERDREKRDKEKEREKRERDKER
ERERERREKEREEKERSRRSRSRSDRDRERDRELEMRDNNRKFRDKKEAVEPEADPERDQ
RTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIA
LSGQLLLGQPVMVKPSEAEKNLVQSTASTGASGGLAGPYGAGDRKLYVGNLHFNMTETQL
REIFEPFGPVELVQLPLDLETGHCKGFGFVQFSHIEHAKAAQSLNGKLEIAGRIIKVSSV
TDHVGSQDITSKSADFDDDEGGLSLNAQSRAMLMKKLDRSGIASSIAGSIGGPMLNGSAP
TPQAISLPIGGQPVLSTPALPTQMIPNQAAEPVGTPSECLLLKNMFDPTTETEPDFDMDI
KEDVEEECSKYGRVKHIYVDKHSAGFVYLQFDTVEGASAAQRAMHMRWFARKLISALFLH
PQVYEAKFKGGA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgacgagtacgattatttggagaagacggtggaggaacaagaagatcgagat
tcaacgaagaagaagaaggaagggagcgagaaaagcgaaagggcttacaggaagcgtgag
gtcgatgaggatgttgatggtgaagacaggaagagtaagaggtcgagaggagatgacgac
cgcgagcgggaccgctctggtcgtgagaaggaccggcataggagtgtaagagatagagat
ggggatagagaaagagaacgagaccgggagaggagcagcagagagaaggatagggagaga
gacagagagaaaagggataaagagaaggagagggaaaagagggagagagataaagagagg
gaaagagaacgggagagaagggaaaaggagagggaggagaaagaaaggtccaggagaagc
agaagtcggtctgatcgggatagagagcgagacagagaactggagatgagagataacaac
aggaaatttagagataagaaagaagcagtggagcctgaggcagatccagaaagggatcaa
agaactgtttttgcataccagatgcctctgaaggcaactgagagagatgcttatgagttc
ttctcaaaagcggggaaggtgagggatgttcggctgatcatggataggaactcaagacgg
tcaaaaggagttggctacattgaattttatgatgccatgtctgtgccaatggccattgct
ctttccggccaacttcttcttggacaacccgtaatggtaaaaccttctgaggcagaaaag
aatcttgttcagtctactgcttccactggggcatcaggtggccttgcaggaccatatgga
gcaggtgatagaaaactctatgtggggaaccttcacttcaatatgactgaaactcagctt
agagagatttttgaaccttttggtcctgtggagcttgtgcaactgcctcttgacctggag
acaggacattgcaagggttttgggtttgttcaattttcgcatattgaacatgccaaggca
gcacagagtttgaacgggaagttggagattgccggtagaattatcaaggtttcatcagtc
actgatcatgttgggagtcaagatattacttccaaatctgcagattttgatgatgatgag
ggtggtttgtctctaaatgctcagtcaagagcaatgcttatgaagaagctggatcgctct
ggaatcgcctcaagcattgcagggtctattggtggacccatgcttaatgggtcagctcct
actccacaagctattagcttgcctattggtggccaacctgtactctcaacgcctgccctc
ccaacacaaatgatacccaatcaagctgcagagcctgttggaacccccagcgagtgttta
ctgttgaagaatatgtttgatccgaccacggagacggaaccagattttgatatggatatt
aaagaggacgtagaagaagaatgttctaagtatggccgagtgaagcatatttatgtggac
aaacatagtgctggttttgtgtatctgcaatttgatacagtggagggagctagtgctgct
cagcgtgcaatgcacatgagatggtttgctcgaaaattgatttcagccttgttcttgcat
ccgcaagtatatgaagccaagttcaaaggtggagcttga
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