Quillaja saponaria (soapbark tree): O6P43_024784
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Entry
O6P43_024784 CDS
T09778
Name
(GenBank) Replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03030
DNA replication
qsa03410
Base excision repair
qsa03420
Nucleotide excision repair
qsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O6P43_024784
03410 Base excision repair
O6P43_024784
03420 Nucleotide excision repair
O6P43_024784
03430 Mismatch repair
O6P43_024784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsa03032
]
O6P43_024784
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_024784
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_024784
DNA replication proteins [BR:
qsa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
O6P43_024784
DNA Replication Termination Factors
ELG1-RFC complex
O6P43_024784
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
O6P43_024784
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
O6P43_024784
Check point factors
HRAD17(Rad24)-RFC complex
O6P43_024784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
KAJ7953027
UniProt:
A0AAD7L8D5
LinkDB
All DBs
Position
10
Genome browser
AA seq
748 aa
AA seq
DB search
MEKSTRKNRVSQPLNSTFSGKQRRSGYEPSDTETDWQETPRHERDRKNATLISEVAKTLS
PRNISPLTLHRRNSSRFENEVSVASSTRRRHNSKSPYKPRSANDDYDNNAFAPKTGLDMQ
RNISPLSKRRHKSPYQQGRKELNGAIDGTVSTNRNQNHRIPEEEEEEANMRLPELNRAKP
NYSRRSVTAPRQRVREMDPPNNYPQTLHRRERTASPLSKGFDSKQTQPSHLKSPSVGEIN
EMVAKATLAKGFKPNNLVIDSTDLSTNGDIFFSRELGALPRQNILLANNGLNNNRGNSSS
TGLSRITSVSSSAASRKRSGKLSTGNSKMSDASGRTTQSMRKFTANRKKSQTETWFACMR
KGSCRTSKSPENRPFDESSYIENAFVVENMRQFWADKHQPASLDGFTSHKQEAQLLKQLV
SQDVCPHILFKGSCGYGKRALTMALLRELYGDACWNLSNDLRYFHIQQRRPMQVIVPITS
SSNHVELNLKLEPNAKYALMGLVKEISSEYAITPEVSNMGLKADHKVIVLYEVDKAAESM
QHLIKWIIECYSDVCKLILCCEDDEDILESVKNSCEIIKVDAPSTNEIMEVLIQIARKEE
IDLPMNFAAKIATKSKQNLRKAIMALEACKAHNYPFLDDQPISLRWEEILIELAAEILSD
PSHTRLFSVRGKFQKLLVDFVSPKLILQKLVEQFIKRVDSNLRRELFYWHAYYEKRLPTG
TTALLKLEEFVAKFMSIYRKCSGYQQRF
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcaactagaaagaacagagtttctcagcctcttaattccacattctcagga
aaacagagacgaagtggctatgaaccttcagatacagagactgattggcaagagactcca
aggcatgaacgagatagaaagaatgcaactttgatttctgaagtggcaaaaactttgtca
ccaagaaatataagcccgttgacacttcacagaaggaattcttcgaggttcgaaaatgaa
gtctcagttgccagctcaacacgaagaagacacaacagcaagtcgccatataagcctcgc
agtgctaatgatgattatgataataatgcttttgcacctaaaacaggtttggatatgcaa
agaaacatcagtcccttgtcgaaacgaagacataaatctccttatcaacaggggagaaag
gagctcaatggtgctattgatggcacagtaagtactaacagaaaccaaaatcacagaata
ccagaggaagaggaagaggaagcaaatatgaggcttcctgaattgaatagagcaaaacca
aactacagcaggagatcagtgactgctccaagacaaagggtgagggagatggacccccca
aacaattatccccaaacactgcacagaagggagagaactgcctcaccgttgtctaaaggc
tttgattcaaaacaaacacaaccttcccacttgaaatcaccttcagttggagaaatcaat
gaaatggttgccaaggcaacgcttgctaaaggttttaaacccaataatctagtaattgac
agtacagacttaagtacaaatggtgatatcttcttttctcgtgaattaggtgccttacca
agacaaaatattttattagcaaacaatggtcttaataataacagaggtaattcatccagt
actggtttatcaagaataacatcagtctccagctctgctgcaagcaggaaaaggagtggt
aagctaagcacgggaaatagtaagatgagtgatgctagtgggagaacaactcaaagcatg
agaaaattcacagcaaatagaaagaagagccaaacagaaacatggtttgcttgtatgaga
aaaggatcttgcaggacttcaaaatcgcctgaaaatcgaccatttgatgaatcttcatac
attgagaatgcatttgtggttgaaaacatgagacaattttgggcagataagcatcaaccg
gcctccctggatggtttcacttcccacaaacaagaagctcaacttctaaagcaactagta
tcccaggatgtatgccctcatattttgttcaagggatcctgtggttatgggaaaagagcg
ttaacaatggctcttctacgggagctatatggtgacgcctgttggaatctatcgaatgat
ttaagatacttccatattcagcaaagaaggcctatgcaagtaattgttccgataacatcc
agttcgaatcacgtggagctcaatttgaagttggaaccaaatgctaaatatgcattaatg
ggattagtcaaggaaataagcagtgaatatgcaattacccctgaagtcagcaatatgggt
ttgaaggcagatcataaagtcatagttctttacgaggttgacaaagcagcagagagcatg
cagcacttgataaaatggattatagaatgctattcagatgtatgtaaactcatactctgt
tgtgaagatgatgaagacatccttgaatcggtgaaaaacagctgcgaaattatcaaggtt
gatgcaccttcaactaatgaaattatggaggttcttattcagatagcaaggaaggaagaa
atcgatctacctatgaactttgcagctaagattgccacaaaatcaaagcagaaccttagg
aaagcaatcatggctctcgaagcatgcaaagctcacaactatccattcttagatgaccaa
ccaatttcacttagatgggaagagatcctgatagaacttgctgcagagatcctatccgat
ccatcacacaccagattattttctgtacgagggaaatttcaaaagcttcttgtggatttt
gtttcccccaaactaattctccagaagctggtggaacagttcatcaagagagttgactcc
aacttaagaagggagcttttctattggcatgcttattatgaaaagagacttcctactggg
acgactgctttattgaaactagaagaatttgtggccaagttcatgagcatatacagaaag
tgctcgggctatcagcagcgtttttag
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