KEGG   Quillaja saponaria (soapbark tree): O6P43_024862
Entry
O6P43_024862      CDS       T09778                                 
Name
(GenBank) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    O6P43_024862
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_024862
   03036 Chromosome and associated proteins [BR:qsa03036]
    O6P43_024862
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     O6P43_024862
Chromosome and associated proteins [BR:qsa03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     O6P43_024862
    COMPASS/SET1 complex (yeast)
     O6P43_024862
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR75_1st KNTC1_N Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N VPS11_N
Other DBs
NCBI-ProteinID: KAJ7953117
UniProt: A0AAD7L8J2
LinkDB
Position
10
AA seq 334 aa
MGGTQSEREEKVSLELSEEILQSMEVGMAFKDYNGKISSMDFHRASSYLVTASDDESIRL
YDVMNATCLKTINSKKYGVDLVCFTPHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRTECFISGSLDRTVLLWDQRADKCQGLLRVQGRPAISYDDQGLVFAIAF
GGYIRMFDVRNYEKGPFDIFSVGGDMSEANVVKFSNDGRLMLLTTSDGHIHVLDSFRGTL
LSTYNLAPVSCNSTLEASFSPEGMFVMSGSGDGSVHAWSVRSGKEVASWMSATSDTGPPV
IKWAPGSLMFVTGSSELSFWIPDLSKLGAYAGRK
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgggagggacacaatccgagagagaagagaaggtatccttggaactgagtgaagaaatt
ctgcagagcatggaagttggcatggcttttaaagactataatggtaaaatcagttcaatg
gattttcacagggcatcaagttatctagtgactgctagtgatgatgaatctattcgtctt
tatgatgtcatgaatgcaacatgtttgaagacaattaatagtaagaaatatggggttgat
ctggtttgcttcactcctcatcctacaactgtcatatactcttcaaaaaatggttgggat
gaatctctgcggcttctctcactgcatgataacaaatacttgagatatttcaaaggtcac
catgacagggttgtctcccttagcttgtgctctagaacagaatgctttatctctggttct
cttgatcgaactgtgttactgtgggaccagagggcagataagtgccagggacttctacgt
gtacaaggaaggcctgctatatcatatgacgatcaagggctagtctttgcaattgccttt
ggtggatacatacgaatgtttgatgttcgcaattatgaaaagggcccctttgacattttt
tctgttggaggagatatgtctgaagcaaatgttgtcaagttcagcaatgatgggagactc
atgcttttaacaacttctgatggacatattcatgtactcgattcatttcgtggcacactt
ttatccacatataatcttgcgcctgtttcatgcaattccacattagaagcttctttcagc
cctgagggaatgtttgtcatgtcaggttcaggggatggtagtgtccatgcctggagtgta
cgaagtgggaaagaggtggcaagttggatgagtgcaacttctgacactggacctcctgta
ataaagtgggcccctggaagtcttatgtttgtaactgggtcttctgaactatcattttgg
atcccagacttgtctaaattaggagcttatgctggaagaaagtag

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