Quillaja saponaria (soapbark tree): O6P43_024918
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Entry
O6P43_024918 CDS
T09778
Name
(GenBank) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_024918
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qsa01009
]
O6P43_024918
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_024918
Protein phosphatases and associated proteins [BR:
qsa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
O6P43_024918
Spliceosome [BR:
qsa03041
]
Common components
Common spliceosomal components
SR proteins
O6P43_024918
BRITE hierarchy
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
KAJ7953182
LinkDB
All DBs
Position
10
Genome browser
AA seq
239 aa
AA seq
DB search
MENSPRKRNSRSPSPWRARSRSRSRSRSLSRPRYRSRSWSRPRQRSRSRSRGRSRSRSDA
RAEVVNPGNTLYVTGLSSRVAQRELEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNI
EDANRCIKYLNNSVLDGRTITVERSRRKRPRTPTPGHYLGLKSTRDDGYHGDRGGRYRSG
YSRDDYAYRRSPRRSPYRGGLNYSPRHSPYHGKSRRERSRSLPYSPYGSPDRKYARGSR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggagaattctcctcgcaaaaggaattcaaggtccccctccccttggagagctcggtca
agatctaggtcaaggtcaaggtctttgtcaaggcctaggtataggtccagatcctggtca
agacctaggcaaagatcccgctccagaagtcgtggcagatcaaggtcaagaagtgatgca
agggctgaagttgtgaatcccgggaatacactttatgtgactggtctatcgtcacgggta
gctcagagagaacttgaagagcacttttctaaggaggggaaggttgcttcatgttttctt
gtggttgagccccgtacacgcatttctcgcgggtttgcttttgttactatggacaacatt
gaggatgccaaccgctgcatcaaatatctcaataattcagttctggatggtcgtactatc
actgttgagaggtcacggaggaaacgtccaagaactccaacacctgggcattatcttggc
ttgaaaagtaccagggacgatggctaccatggtgatcgtggtggaaggtatcgcagtggc
tatagtcgtgatgactatgcgtatcgcaggtcaccaaggcgctcaccatatcgaggtggt
ctgaattattcacccagacactcgccctatcatgggaaatctagaagggagcggtccagg
tcccttccttattccccttatggaagtcctgataggaagtatgctcgtggatctaggtga
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