Quillaja saponaria (soapbark tree): O6P43_024941
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Entry
O6P43_024941 CDS
T09778
Name
(GenBank) Pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_024941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_024941
Spliceosome [BR:
qsa03041
]
Complex B
Other components
Prp19-related factors
O6P43_024941
Complex C
O6P43_024941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-ProteinID:
KAJ7953207
UniProt:
A0AAD7L8Q8
LinkDB
All DBs
Position
10
Genome browser
AA seq
274 aa
AA seq
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MPQKGPDFTQAGGGSKLAISSVPDEEEELHDERPNFDENSDSEDDLPVKENAEIDFKNLS
ERQKKWHELRNKMQEAKKRNQIEIAAERKRMEAPSESRGISKQKWLEERKKKIGKLLDAN
GLDLTKAYMLDTQEAAETKYKKWEKDPAPFGWDVFNQKTLYNAHKKRTKKIEVDAEEYNK
MKEVDPEFYRDASSLQYGKAPKISEEKIERMVKELKERDEKRTSFSRRRKFHEEKDIDSI
NDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaagggaccagattttacgcaagctggtggtgggagtaagctggccatctca
agtgtgccggatgaggaggaagaactacatgatgaaagaccaaattttgatgaaaattct
gatagtgaagatgaccttcctgtcaaggaaaatgctgaaatagattttaaaaatctcagt
gagaggcagaaaaaatggcatgagttgaggaataagatgcaagaagcaaagaagcgcaat
caaattgaaatagctgctgaaaggaagagaatggaggctccatcagaatcgaggggtatt
tctaaacaaaaatggcttgaggagaggaagaaaaaaattggaaaactcttagatgcaaat
ggtttggatttgacaaaggcttatatgcttgatacacaagaggcagcagaaacaaagtat
aagaaatgggaaaaggatcctgctccgtttggttgggatgtttttaaccagaaaactctt
tacaatgcacacaaaaagaggacgaagaaaattgaggttgacgcagaagaatacaataaa
atgaaagaagttgatccagagttctaccgcgatgcttcaagtcttcaatatgggaaggca
ccgaagatctctgaggagaagattgaacggatggtaaaggaactaaaggagcgggatgag
aagcgcacttcctttagcaggaggaggaaattccatgaagagaaagatattgattccatc
aatgaccgtaatgagcatttcaacaagaagattgagcgagcctttggtaaatacactcta
gagatcaaaaacaatcttgagcgtggaaccgcattgcctgattaa
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