Quillaja saponaria (soapbark tree): O6P43_027094
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Entry
O6P43_027094 CDS
T09778
Name
(GenBank) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
O6P43_027094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_027094
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
O6P43_027094
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GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
Ku_PK_bind
Motif
Other DBs
NCBI-ProteinID:
KAJ7950986
UniProt:
A0AAD7L513
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Position
11:complement(14603985..14611949)
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AA seq
596 aa
AA seq
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MARNREALLLLLDVGPSMHSVLPETEKVCSMLVQKKLMYNKYDEVGIVLFGTKETDNDLT
KEVGGYQHVVVLRNIKVVDGDLVEVLQELPRGTNDGDFLDAIIIGMDLLIKKYGETNKGK
KRLCLITNALCPVKDPYEGTKEDQVTTIAKQMTVHGMKMESIVVRCLTGDSKNRTVQFHF
MGLFETRNISPVTIFKGDLEISSKLRIKVRVYKKTSEEKLPTLKKYSDKAPPSDITATHE
VKVDYEYKSIEDHGKVVPPDQRIKGYRYGPQIVPISSAEWDAVKFKPEKGVKLLGFTDSS
NILRHYYMKDVNIFLAEPGNTRAIAAVSSLARAMKEMNKVAIVRCVWRQGQSNVVVGVLT
PNVSEKDNIPDSFYFNVLPFAEDVREFQFPSFSNFPASWQPNEQQQEAADNLVKMLDLTL
PGKGEALQPDFTPNPVLQRFYHHLELKSKHPDSAVPPLDETLKKITEPDVELLGKNKSVI
DSFRRCFELKENPKIKKSRRLLREKMSGSIDRESNADISAQPLPFERVASLNRNQSCSMI
SSSHLCKFCQEKNLNGFCQYLVSKDLTLISKIEAIDSEVTDDEARSFLVKSETKVE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaatagggaagcgttgcttttgttacttgatgttggtccttcaatgcacagt
gttcttccagagactgaaaaagtctgttcaatgcttgtacagaagaagttgatgtataac
aaatacgatgaagtgggtattgttttgttcggaactaaagaaaccgacaatgatctgact
aaggaagtaggtggatatcaacatgttgttgttctaagaaatatcaaagttgtggatgga
gatcttgttgaggttttgcaagaactccctcgagggactaatgatggtgattttcttgat
gctataattattgggatggatttgctgataaagaaatatggtgaaacaaacaagggaaag
aaacgtctgtgtcttatcacaaatgcactatgtcccgttaaagatccatatgaagggacc
aaagaagatcaagttacaaccatcgctaagcaaatgactgtacatgggatgaaaatggaa
agtatagtagtaagatgccttactggagattcaaaaaacagaacagtccagtttcatttt
atggggctcttcgaaacccgaaatatatctccggttacaatattcaaaggtgatcttgaa
atcagctcgaagctcaggattaaggtgcgagtatacaaaaagacctcagaagaaaagttg
ccaactctgaagaaatattctgataaggcgcctccaagtgatataactgccacacatgaa
gtcaaagtagattatgagtataaaagtattgaagatcatggtaaagttgttcctcctgat
caaagaattaaaggttatcgttatgggcctcaaatagttcctatatcatctgcggaatgg
gatgctgtcaagttcaaaccagaaaagggtgtgaagcttctaggatttactgattcctca
aacatattacgacactattacatgaaagatgtcaatattttccttgctgaaccgggaaac
acaagggccattgctgctgtttcttccctagcaagagccatgaaagaaatgaacaaggtg
gccattgtgcgctgtgtttggaggcagggacaaagcaatgttgtcgtgggggtcttgaca
cctaatgtatctgagaaagataatattcctgattccttttacttcaatgtacttcctttt
gctgaggatgttagagagtttcaattcccttctttcagcaatttcccagcatcatggcag
ccaaatgaacaacagcaagaagctgctgataacttggtaaagatgcttgacctgacactg
cctggcaaaggggaagctttgcagcctgactttacaccaaatcctgttctacagcgtttc
taccatcatcttgagttaaaatctaagcacccagattctgctgttcccccccttgatgaa
actctcaagaaaataactgaacctgatgtggaactacttgggaaaaacaaatctgtgatt
gactcatttcgtaggtgttttgaattgaaggaaaatcccaaaataaaaaaatcaaggcgg
ttattgagagagaagatgtctgggtcaattgacagagagagcaatgcagacatttctgct
caacctttgcccttcgaaagggttgcatccttgaacaggaaccaaagctgttcaatgatt
tcctccagccatctttgcaaattctgtcaggagaaaaaccttaacggtttctgtcagtat
cttgtatccaaagatctgaccttgatcagcaagatagaagccatagacagtgaagttact
gatgatgaggctagaagttttttggtcaaatctgagaccaaagttgagtga
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