Quillaja saponaria (soapbark tree): O6P43_027648
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Entry
O6P43_027648 CDS
T09778
Name
(GenBank) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03082
ATP-dependent chromatin remodeling
qsa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
O6P43_027648
03083 Polycomb repressive complex
O6P43_027648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_027648
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
O6P43_027648
Histone modification proteins
HAT complexes
HATB complex
O6P43_027648
HDAC complexes
Sin3A-HDAC complex
O6P43_027648
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
O6P43_027648
PRC2.2
O6P43_027648
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
O6P43_027648
Heterochromatin formation proteins
Other heterochromatin formation proteins
O6P43_027648
Chromatin remodeling factors
NuRD complex
O6P43_027648
NuRF complex
O6P43_027648
NuRF complex (fruit fly)
O6P43_027648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-ProteinID:
KAJ7951633
UniProt:
A0AAD7L4V9
LinkDB
All DBs
Position
11
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AA seq
489 aa
AA seq
DB search
MKERGKGSVPTVDKRYTQWKSLVPILYDWFANHNLVWPSLSCRIGMVAEEMWLWEKGEKC
DDFGGARWGPQLEQGTYKTRQRLYLSEQTDGSVPNTLVIANCEIVKPRVAAAEHISQFNE
EARSPFVKKYKTLIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDIEAQPNRHAVLGAAE
SRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVFWSIHDHIATLAAHAGATKSPGS
GGSKQGSKAGGNNEKPTESPSIGPRGIYQGHTDTVEDVQFCPSSPQEFCSVGDDSCLILW
DARVGPTPAVKVEKAHDADLHCVDWNPHDINLILTGSADNTVRMYDCRNLTSGGVGSPVH
QFEGHDAAVLCVQWSPDKSSVFGSSAEDGILNIWDHEKVGKELDSSGPTIQNAPPGLFFR
HAGHRDKVVDFHWNASDPWTIVSVSDDCESTGGGGTLQIWRMIDLIYRPEEEVLAELDKF
KSHIVTCTS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagaggaaaagggagtgttccgactgtggacaagaggtatacccagtggaaa
tctttggttccaattctctatgactggtttgccaaccacaatctcgtctggccttctctt
tcttgccgtattggtatggtagctgaggagatgtggctctgggaaaaaggagaaaaatgt
gatgattttggtggcgcaagatggggtcctcaactagagcaaggcacttacaagacccgg
caacgtctttatctttcagagcagactgatggaagcgttccaaatacacttgtcattgca
aactgtgagattgtcaaacctagggttgcagctgcggagcacatatcacagttcaatgaa
gaagcacgctctcccttcgtgaagaagtacaaaacccttatacatcctggcgaggtcaac
agaatcagagaactaccacaaaatagtaagatagtggccacccacaccgatagtcctgat
gttcttatatgggacatcgaggctcaacctaatcgtcatgctgtcctgggagctgctgag
tcccgtcctgatctgatattgactgggcatcaagataatgctgaatttgctcttgccatg
tgcccaactgagccctttgtgctttctggaggcaaggataagtctgtggttttttggagt
attcatgatcatattgcaactttagcagcacatgcaggggccactaaatctcctggatct
ggtggctctaaacaaggctcaaaggctggtggaaataacgagaaacctacagaaagccct
tctattggaccacgaggtatctaccaggggcatacagatactgttgaagatgttcaattt
tgcccatcgagtccacaggagttctgtagtgtaggcgatgattcttgcctcatactttgg
gatgcacgagttgggcctacccctgctgtcaaggttgagaaagcacatgatgcagatctt
cattgtgtggattggaatcctcatgacataaatctcatcctgacaggttctgctgataat
actgttcgcatgtatgactgccggaatctcacctccgggggagtcggctctcctgttcat
caatttgagggtcatgacgcagctgtcctttgtgtacagtggtcccccgacaaatcgtcc
gtgtttggaagttctgctgaggatggcattctaaacatctgggatcatgagaaggttggt
aaagagctagattctagtggtccaacaatccaaaatgctcctcctggcttattttttagg
catgctgggcatagggacaaggttgttgacttccattggaatgcatctgatccttggaca
attgttagcgtctctgatgattgtgaaagtactggagggggtggtacacttcagatatgg
cggatgattgatttgatttaccggccagaggaagaggtccttgctgaattggataagttc
aaatctcatatagtgacatgcacctcttga
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