Quillaja saponaria (soapbark tree): O6P43_028616
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Entry
O6P43_028616 CDS
T09778
Name
(GenBank) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03440
Homologous recombination
qsa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O6P43_028616
03460 Fanconi anemia pathway
O6P43_028616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsa03032
]
O6P43_028616
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_028616
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
O6P43_028616
DNA replication proteins [BR:
qsa03032
]
Eukaryotic type
DNA Topoisomerases
O6P43_028616
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
O6P43_028616
FA (Fanconi anemia) pathway
O6P43_028616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-ProteinID:
KAJ7948091
UniProt:
A0AAD7KZL1
LinkDB
All DBs
Position
12
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AA seq
912 aa
AA seq
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MGGRTINVLNVAEKPSVAKSVATILSRNQGLRIREGRSRYNKIFEFSYSIRGQPCHMLVT
SVTGHLMELEFDERYRKWHSCDPAELYHAPVRKYVPEDKKDIRRTLEEEARRCQWLVLWL
DCDREGENIAFEVIEVCAAVNRHLILKRARFSALIDREIHEAVQNLVEPNQWFADAVDAR
QEIDLRIGASFTRFQTMLLRDAFAMDSVTDDKNLVLSYGPCQFPTLGFIVERYWEIQSHE
PEEFWTINCSHRSDEGLATFNWMRGNMFDYTSAVIIYEMCVEEPTATVTNVRHHERLKYP
PHPLNTIELEKRASRYFRMSSEQTMKVAEELYQAGFISYPRTETDTFPSRTDLHTIVEEQ
QGHPDWGSYAQRLLDSGAGLWRNPSSGGHDDKAHPPIQPTKFSTGESGWREEHWKLYELV
VRHFLACVSQPAVGAETIIELDIAGELFSASGRVILAKNYLDVYRFESWGGSMIPPYVVG
QQFIPTALTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDTNM
RFTPTNLGESLVMGYDDMGYKLWKPYLRAVMERDMKAVSEGAKSKAEVLASSLQQMKACF
LDARLNKVKLFEAMEVFFERSNRSGGDEQHVAGEVVRRCGLCQEEDMVLKRKPDGNFMVG
CLGFPQCRNAIWLPGPVSEAAVTTNICNICTPGPVYKIQFKFRLLEIPPNYNANHLGCIG
GCDETLIQLIEICGTGSRMPARGRGPTAPSSNGYQSNTRQGSCIYCQETGHSSSGCPSQL
SVSRNARSRGMNHHNEGTSVSCSTCGTPCALRTANTANNRGRKFYSCPSRDCNFFVWEDS
VNNGTGGSSLGSNTGRTSNASRNSGRGRGNRGGLHAAATAFVSATGDPVSGRRCFVCGDP
SHFANGCPNRGT
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgggtggccggaccatcaacgttctgaacgtggcggagaagccttcggtggcaaaatcc
gtagccaccatactgtccaggaaccagggtttgagaattagggaaggtcgttcacgctac
aacaagatcttcgagtttagttactcgattcgaggtcagccatgccatatgcttgtcaca
tccgtcactggccacctcatggagctcgagttcgacgagcgttaccgaaaatggcattca
tgtgaccccgccgagctctatcatgcacctgtccgcaaatatgtccccgaagacaaaaag
gatatcaggagaacattagaagaggaagcgaggagatgccagtggcttgtattgtggctt
gattgtgacagagaaggagaaaatattgcatttgaagtaattgaagtatgcgctgctgta
aatcgtcatctcattttaaaaagggctcgtttttctgcattgattgacagggaaatccat
gaagctgtacagaatcttgttgagccaaatcagtggtttgctgatgcagtggatgctagg
caagagatagatcttcgtattggtgcttctttcactaggttccagaccatgctactcaga
gatgcatttgccatggattctgttacagatgacaaaaaccttgttttaagttatggccct
tgtcagttccctacacttggatttattgtggaacgatattgggagatacaatcacatgag
ccagaagaattttggacaatcaattgctcccacagatcagatgaaggccttgctactttc
aactggatgaggggtaatatgtttgattatactagtgcagttatcatatatgagatgtgt
gtggaggaaccaactgcaactgttaccaatgttagacatcacgagagactaaagtatcct
ccacatcctttgaataccattgagcttgaaaagcgtgcttcacgatacttccggatgagt
tcagaacaaacaatgaaggtggcagaagagctataccaagctggtttcatcagttatcct
cgtacagagactgatacctttccctcaagaactgatctgcatactattgtggaagaacaa
caagggcatcctgattggggatcatatgcacaacggttgttggactctggggcaggactt
tggagaaatcctagtagtggtggacatgatgacaaggcccacccacctattcagccaaca
aagttttctactggagaatctggatggagagaggaacactggaaattgtatgaactggtt
gttcgccatttcctggcatgtgtctcgcagcctgccgtaggggctgaaactatcatcgaa
cttgatattgctggtgaattattctctgcatcagggagagtaatattagctaaaaactac
ctggatgtttaccgttttgaatcttggggaggatcaatgattccaccatatgtggttggg
caacagtttattccaacagcattgacccttgattctggagttaccaggccgccaccactc
ctgagtgaagctgatttgctaagttgtatggacaaggagggcattggtacagatgctaca
atgcatgatcacatcaaaaagctgctcgatcggttttacgcaaccaaggacactaacatg
cgtttcacgccaactaatcttggtgaatcacttgttatgggctatgatgatatggggtat
aaactatggaaaccatatctccgagcagttatggagcgtgatatgaaagcagtcagtgaa
ggtgctaaaagcaaagctgaagttttggcaagtagcttgcagcagatgaaggcttgcttc
ttagatgctaggttgaacaaagttaaactctttgaagccatggaagttttttttgaaaga
tctaatagatctggtggggatgagcagcatgtggcgggagaagttgttcgacgatgtgga
ctctgccaagaagaagatatggtgcttaagcgaaagccggatggaaattttatggttgga
tgcttgggttttccgcagtgcagaaatgctatctggctcccaggaccagtatcagaagcc
gctgttaccacaaacatttgtaacatttgcactccaggtcctgtttacaagattcaattc
aaatttcgcctgctggaaataccaccaaattacaatgcgaaccatttgggttgcataggt
ggctgtgacgagactcttatacagttgattgaaatctgcggcactggttcacgcatgcca
gcacgagggagaggaccaactgctccatccagcaatggctaccaaagtaacactaggcaa
ggtagttgcatatattgccaagaaacagggcattcttctagtggttgtccttcacagctt
tcggtttctcgaaatgctcgatctcgtgggatgaaccatcataatgaaggaacttcagtt
tcatgtagtacatgtggaacaccatgtgctttgcgaactgccaatacagcaaataacaga
ggaagaaagttctactcatgtccatcaagggattgcaacttctttgtatgggaggatagc
gtcaacaatggcactggtggaagttctctaggttcaaacactggcagaacatctaatgct
agtagaaatagtggtcggggcagaggcaaccggggtggattacatgctgctgcaacggct
tttgtgtcagcaactggggatcctgtatctggcagaaggtgttttgtatgtggtgatcca
tcacactttgcaaatggttgcccaaatcgtggaacctga
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