Quillaja saponaria (soapbark tree): O6P43_028638
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Entry
O6P43_028638 CDS
T09778
Name
(GenBank) Replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03030
DNA replication
qsa03410
Base excision repair
qsa03420
Nucleotide excision repair
qsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O6P43_028638
03410 Base excision repair
O6P43_028638
03420 Nucleotide excision repair
O6P43_028638
03430 Mismatch repair
O6P43_028638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsa03032
]
O6P43_028638
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_028638
DNA replication proteins [BR:
qsa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
O6P43_028638
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
O6P43_028638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
RCF1-5-like_lid
Rad17
AAA_22
AAA_30
AAA_19
BRCT_2
AAA_18
RuvB_N
AAA_assoc_2
nSTAND3
Gp44_lid
AAA_24
Sigma54_activ_2
AAA_5
AAA_14
Zeta_toxin
DNAX_ATPase_lid
AAA_16
AAA_28
NTPase_1
AAA_17
Motif
Other DBs
NCBI-ProteinID:
KAJ7948115
UniProt:
A0AAD7L062
LinkDB
All DBs
Position
12
Genome browser
AA seq
917 aa
AA seq
DB search
MTDIRKWFMKSHDKGNANESKPTKQDKPSPAKLQPEKPMPGGQESSGRRKTSKYFTEKQK
PKEETEKEELPAKRKNQKHSEDSSCGRGHGGRGPSATPAGVNTTASKKLKSGSGRGASQK
YLDIEESDEDDVKETASPSKSGGRGRGGRGASATPAGGRGRGSGRGGFMNFGERKDPPHK
GEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTTYLLCDEDI
GGRKSAKAKELGTSFLTEDGLFDMIRASKPVKVPAQEESKKSVDKVVKPLSKKSSHKVEV
KRSLGSGAPPAKPKAQNIEQSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLVRWNEQFLD
SGNKRKGQKPNDSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADAKI
EKGIGGSNANSIKELVSNESLSVNMDRSKHTKTVLIMDEVDGMSAGDRGGVADLIASIKI
SKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQMAKRLMQVAKAEGLQVNEIALEEL
AERVNGDMRMALNQLQMKNISPFTAVDKLFGFNAGKLRMGERIDLSMSDPDLVPLLIQEN
YINFKPSSAGKDDNDMKRMDLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLASCIIPA
ALLHGRRQTFEQGERNYNRFGGWLGKNSTMRKNFRLLEDLHVHVLASRESSSGRETLRLE
YFTLLLKQLTEPLRLLPKDEAVRKVVEFMNVYSFSQEDYDTIVELSKFQGHPNPLDGIPP
TVKAALTKAYKEGSKAQMVRAADLVTLPGIKKAPKKRIVAMLEPSDDGLGEGVGDTLAES
EEENSSDTDELGGTTAGEKLQLELQSLNSKATQVHLDLKGTGTSSAKKTPAGRGKGGSSA
TEKKSVRGSGSGRKRKR
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacggatataaggaagtggtttatgaaatcccatgacaagggtaatgccaacgagtcc
aagcctacaaaacaagacaagccttctccagctaaactacagccggaaaaaccaatgcct
ggaggccaagaaagttcagggagaaggaaaactagcaaatatttcactgagaaacaaaag
ccaaaagaagaaacggaaaaagaggaacttccagctaaaagaaagaatcaaaagcacagt
gaggattcatcctgtggacgaggtcatggtggaagaggtccatcagcaacaccagctggt
gttaatactactgcgagcaagaaattgaagagtgggtcaggcaggggagcttcacagaaa
tatctagatatagaggaaagcgatgaagatgatgttaaagaaactgcatcccccagtaag
tctggtggaagaggtcgtggtggaagaggtgcatcagcaacaccagctggtgggcgaggt
agaggtagtggaaggggtggctttatgaattttggagaaaggaaagatcctccacacaaa
ggagaaaaggaagtccctgaaggtgcttctgattgtttagctggtttaacttttgtaatt
agtggaacccttgacagtttagaacgagaagaagcggaagatttgatcaaacgccatggt
ggtcgtgtcactggatctgtcagcaagaaaacgacttatcttttatgtgatgaggatatt
gggggaaggaaatctgccaaagccaaagagctgggtacttcctttctcaccgaggatggg
ttatttgatatgatccgtgcatcaaaacctgtaaaagtgcctgcacaagaagaatcaaag
aaatcagtggataaagtggttaaacctctgtcaaagaaaagttctcacaaagtagaagtg
aagagatctttgggctctggtgctcccccagccaagcctaaggctcaaaatattgagcag
tcttctttgacgtggacagaaaagtataagccaaaggttccaaatgacattattggaaat
cagtcactggttaagcaactccatgattggttggtacgttggaatgaacaatttcttgat
agtggaaataaaagaaaggggcaaaaaccaaatgactctggtgctaaaaaagctgtacta
ttaagtgggacacctggtatcggaaaaactacttcagcaaagttagttagtcagatgctg
ggtttccaggctatagaggtaaatgctagtgatagccgtgggaaggctgatgccaaaatt
gaaaaaggaatcggtggaagtaatgcaaattctataaaggaacttgttagcaatgagtct
ctcagtgtcaacatggatcggtctaagcataccaaaactgtgctcattatggatgaggtt
gatggaatgtcagctggtgataggggtggtgttgctgatcttattgccagcatcaagata
tccaagattcctattatctgcatttgtaatgatcgttatagccagaaactgaaaagtctt
gtgaactactgtctgcttctcagctatcggaaacctacaaaacaacagatggcgaagagg
ttgatgcaagttgcaaaagctgaagggcttcaagttaatgagattgctcttgaggaacta
gcagaaagagttaatggggatatgcgcatggcactgaatcagttacagatgaagaatatt
tcaccatttacggccgttgataagctttttggttttaatgcgggaaagttgaggatgggt
gagcggattgacctaagcatgagtgatcctgatcttgttcctcttcttattcaggagaat
tatattaattttaagccaagctctgctggtaaggatgacaatgacatgaaacgaatggac
ctgattgcccgtgctgctgaatctattgctgatggggatatagtaaatgtacagattcga
agatatcgacagtggcagctctctcaaactagttctcttgcatcctgtataattcctgct
gcactgttgcatggacggaggcagacatttgaacagggagaacggaattataacagattt
ggtggatggcttggaaagaactcaacaatgagaaaaaattttaggcttttggaagattta
cacgttcatgttcttgcttctcgtgaatccagttcagggagagaaaccctgcgcttagaa
tactttacacttctgctgaagcaattgactgaaccactccggttgctgcctaaggatgaa
gctgttcggaaagttgtggagtttatgaatgtatactctttcagtcaggaggactatgat
accattgttgagttgtcaaaatttcagggtcatccaaatccactggatggcataccacct
actgtcaaagcagctctgacaaaagcatacaaagaaggtagcaaagcacagatggtccga
gctgcggatctagtcacccttcctggaataaaaaaggcccctaagaagcggattgttgca
atgctagaaccatctgatgatggattaggagaaggagttggtgacacattggcagaaagt
gaagaagagaactcctctgacacagatgagcttggaggcaccactgctggcgagaagctg
cagttagaacttcaaagtttaaattctaaagcaactcaagtacacttggatctaaaggga
acagggacttcaagtgccaagaagacaccagctggaagaggaaaaggtggttcatcggcc
acagagaagaaaagtgtgcgaggttcagggtctggccgtaagaggaagaggtga
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