Quillaja saponaria (soapbark tree): O6P43_028846
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Entry
O6P43_028846 CDS
T09778
Name
(GenBank) Nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03013
Nucleocytoplasmic transport
qsa03015
mRNA surveillance pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_028846
09122 Translation
03013 Nucleocytoplasmic transport
O6P43_028846
03015 mRNA surveillance pathway
O6P43_028846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_028846
03041 Spliceosome [BR:
qsa03041
]
O6P43_028846
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
O6P43_028846
Spliceosome [BR:
qsa03041
]
Common components
Common spliceosomal components
Cap binding complex
O6P43_028846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-ProteinID:
KAJ7948359
UniProt:
A0AAD7PB49
LinkDB
All DBs
Position
12
Genome browser
AA seq
251 aa
AA seq
DB search
MASLFKDPAKLSAYRDRRFSGTQEEFEHALQTSTTIYIGNMSFYTTEEQIYELFTRAGEI
KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFLEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAFQPVMAPQYGRHG
GSHGHGGSHRYGRDYNRKRYRDDDRHVHDSSKRASDHESRRNPDSRPEKNPRFRESGDSD
EEDEDDRKKRS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggacccagctaagctttcagcttatcgggatagaagattttct
ggaacgcaagaggaatttgaacatgcacttcagacatcgactaccatttacatagggaat
atgtcattttacacaacagaggagcaaatttatgagcttttcactcgagctggagaaatt
aagaaaatcatcatgggattggacaagaactcaaagacaccttgtggcttttgttttgtt
ttatactactctcgagaagatactgaggatgctgttaaatatataagcggaacaatactt
gatgaccgtcctattcgtgttgattttgattggggattcctggaaggcagacaatggggt
cgtggtcgtagtggcggccaggtgcgtgatgaatatcgtactgattatgatcccggtaga
ggtggttatggaaagttagttcagaaagagttggaagcacaaaggcagcttgtagattac
gggactggttcgttgggcgcattccaaccagttatggcacctcagtatggtagacatggt
ggtagccatggtcatggtggttctcatcggtatggtagagattacaatcggaagcgatat
agagatgatgaccgccatgtgcatgactcctcgaagagagcctcagatcacgaatctagg
aggaaccctgactcaagaccggagaagaatccacgatttcgtgagagtggtgattctgat
gaagaagacgaagatgatcgaaagaaacgatcttag
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