Quillaja saponaria (soapbark tree): O6P43_029326
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Entry
O6P43_029326 CDS
T09778
Name
(GenBank) serine/arginine-rich splicing factor SR45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03013
Nucleocytoplasmic transport
qsa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
O6P43_029326
03015 mRNA surveillance pathway
O6P43_029326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_029326
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
O6P43_029326
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
KAJ7948908
UniProt:
A0AAD7L0D8
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All DBs
Position
12
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AA seq
416 aa
AA seq
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MAKPSRGRRSPPSGSVSTSRSRSYSDSDSRSSSLSRSRSPSRSLSRSRSVSTSSPSRSVS
SRSRSPPPQRKKSPAEVVKRGRSPPSHSKRTSPPPRKASPVNASLVLHIDKLSRNVNEGH
LREIFGNFGEIVNVELAIDRSVNLPKGYGYVEFKSRVDAEKALLHMDGGQIDGNIIKARF
TLPPRQKSPPPKTSGTSLKRDVPRNDNVSANFEKDGPKRQREPSPRRKPLPSPQQRSPVP
RRVGSPKRQQDSPRRRADSPVRRRLESPYRRGDTPPRRRPISPPRGRSPSPRRLRSPAKV
SPRRIRGGSPGRRRSPPPPRHRTPPRRIRSPPRRSPIGRRRIRSPIRRPGRSRSRSFSPR
RGRPPVRRGRSSSYSDSPSPRKVARRSRSRSPRRPLRGRGSSNSSSSSSPPPPRKP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctagccgaggtcgtcgctcgccaccgtcaggttccgtttcgacctctcgc
tctagatcctactccgactctgattcgcggtccagctctttgtccagatcccggtcccct
tcgcgctctctatctcgctcgagatctgtatccacgtcctctccgtcccggagtgtcagt
tctcgtagccgaagccctcctcctcagaggaagaaaagtcctgctgaagtagttaagcga
ggccgctcgccgccatcccattctaaaaggacttctccacctccaaggaaagcttctcca
gttaatgcatctcttgttcttcacatcgataaactcagcagaaatgtgaatgaaggccat
ctcagagaaatatttggtaattttggtgagattgtaaatgtggagctggcgattgatcgg
agtgttaaccttccaaaaggatatggatatgtggaatttaagtcaagagtggatgctgaa
aaagccttgttacacatggatggtggccaaatagatgggaatattattaaggcaaggttt
acattacctccacgacagaagtcccctcccccaaaaacatctggaacttctctgaagcga
gatgttcctagaaatgataacgttagtgcgaattttgagaaagatgggccaaagcggcaa
agagaaccttctccacgaagaaaacctctcccctcaccacagcagagatctcctgtacct
cgaagagttggatctccaaaacggcaacaagattcaccacgtcgtcgtgcagattctcct
gttcgccgtcgcctggaatctccttatcgccgtggagacacacctccaaggaggaggcct
atatctccacctagaggccgttccccatcaccaaggcgccttaggtcccctgcaaaggtc
tcaccaagaaggatccgtgggggcagtccaggtcgcagacgttctccccctcccccgagg
caccgtacaccaccgagacgaattcgtagtcctccaagaagatcaccaattggtcgcaga
cggattcgctctcctatacgaaggcctggtcgctcgcgttcaagatccttctcaccacga
agaggcagaccaccagtgagacgtggaaggtcatcatcctactctgactcaccaagtcca
cgcaaggtggctcggagatcaaggagtcgcagtccaagaaggccattgagaggaagaggc
agtagcaacagcagtagcagcagttcaccaccaccacctagaaagccatag
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