Quillaja saponaria (soapbark tree): O6P43_029516
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Entry
O6P43_029516 CDS
T09778
Name
(GenBank) Small nuclear ribonucleoprotein family protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_029516
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_029516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_029516
03041 Spliceosome [BR:
qsa03041
]
O6P43_029516
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_029516
mRNA degradation factors
5'-3' decay
Lsm complex
O6P43_029516
Spliceosome [BR:
qsa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
O6P43_029516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
KNOX2
Motif
Other DBs
NCBI-ProteinID:
KAJ7949138
UniProt:
A0AAD7PB51
LinkDB
All DBs
Position
12
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPEDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLPSDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaggaaagaaacagttcttgacttggcaaagtttgtggacaaaggtgttcaa
gtcaagcttactggtggcagacaagtgacggggactttaaagggatatgaccaattactt
aaccttgtcctagacgaagctgtagagttcctaagagatcctgaagatccactgaaaact
actgatcagaccagacgtcttggcttaattgtctgtaggggaactgctgtgatgttggtg
tcgccgactgatggtacagatgagattgcaaatcccttcctgccgtcagatggggcatag
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