KEGG   Quillaja saponaria (soapbark tree): O6P43_029728
Entry
O6P43_029728      CDS       T09778                                 
Name
(GenBank) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03013  Nucleocytoplasmic transport
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_029728
  09122 Translation
   03013 Nucleocytoplasmic transport
    O6P43_029728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_029728
   03041 Spliceosome [BR:qsa03041]
    O6P43_029728
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     O6P43_029728
Spliceosome [BR:qsa03041]
 Complex C
  Other components
   EJC/TREX
    O6P43_029728
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    O6P43_029728
SSDB
Motif
Pfam: efThoc1 Herpes_UL92
Other DBs
NCBI-ProteinID: KAJ7949389
UniProt: A0AAD7L0L4
LinkDB
Position
12:10752927..10766847
AA seq 604 aa
MEVFKRAILQPGPPETFALQTVQEVIKPQKQTKLVQDENQFLENILRTLLQELVSSSVQS
GEQIMEYGQSIDDRETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCED
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSALNIKGVFNTSNETKYEKEPPHGISIDFNFYKTFWSLQEYFCNPTSLSLAPAKWQKFT
SSLLVVLSTFEAQPLSDEEGDANNFEEESANFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKSDKDVPSESMKEEIQSCEERVKKLLEMTPPKGKEFLHKIEHILEREKN
WVWWKRDGCLPYEKQPTEKKVVQDGAKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
QTPSIMEYWKPLAEDMDASAGIEAEYHHKNNRVYCWKGLRFAARQDLEGFSRFTDHGIEG
VVPLELLPPDVRSKYQAKPNERSKRAKKEETKGAAHQAEDNQITIPSSEIDGEGIRGGVS
AAMEFDATAIPGTQGGTSTPDDHQKQSSDTDVGQEAGQLEADAEVDAAMIDGETDADVDL
DAVG
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggaagtgttcaagagggccatattgcagcctggtccacctgaaacttttgctttacag
acagttcaagaagttataaagcctcagaaacaaacaaagttggtccaagatgagaaccag
ttcttggaaaatattctaaggacgctgcttcaggaacttgtgtcatcttcagtacagtca
ggggagcaaataatggagtatggacaatcaattgatgatagggagacaactcagggtcat
attcctcgtcttcttgacatagtgttgtatctttgtgagaaagaacatattgaaggtgga
atgatttttcagctgttggaagacttgacagaaatgtctacaatgagaaactgcgaagat
atttttggttatatagagagtaagcaagatatattaggaaagcaagagctttttgctcgt
ggaaaacttgtgatgctgagaacctgcaatcaacttcttcgccgtctgtcaaaggctaat
gatgtggttttctgtggacgaattctcatgtttttggctcacttctttccattgtctgaa
cgttcagctctaaatatcaaaggtgtttttaacacatcaaatgaaacaaagtacgagaaa
gaaccccctcacggaatatctattgatttcaacttttataagactttttggagcttacag
gagtacttttgtaaccctacttctttaagtcttgctccagcaaagtggcagaaattcact
tccagtttattggttgtattgagtacctttgaagcgcaacctttaagtgatgaagaaggt
gatgctaataattttgaggaagagtcagctaatttcagcataaagtatcttacaagcagt
aaactaatgggcctagagttaaaagatccaagttttcgacgccatgtccttgtccaatgc
ctcatattgtttgactatttaaaggcccccgggaaaagtgacaaagatgtaccgtctgaa
agcatgaaggaagagatacaatcatgtgaggagcgtgtaaaaaagcttcttgaaatgact
ccacccaaagggaaggagtttcttcataaaattgagcatatattggaacgggagaaaaat
tgggtatggtggaaacgtgatggttgcctgccatatgagaaacaaccaacagagaagaaa
gtggtgcaagacggagccaagaagcgtaggccaagatggagactaggaaataaagaactc
tctcaattgtggaagtgggcagatcagaatccgaatgctttaactgatcctcaacgtgtt
caaactccttctattatggagtactggaaacccttagctgaagatatggatgcttctgct
ggaatagaagctgaatatcaccacaaaaataaccgggtttattgttggaaaggtcttaga
tttgctgcccgacaggacttggagggattttctagatttactgaccatggaatcgaaggg
gtggtaccattggaacttttgccacctgatgtccgctccaaataccaagcaaaaccaaat
gaaaggtccaaacgtgctaaaaaggaagaaacaaaaggtgctgcacatcaggcagaggat
aatcagattacaataccttcaagtgaaatagatggtgaaggaatcagaggtggtgtttca
gcggcaatggaatttgatgccactgctattcctggtacccaaggtggcacttcaacgcct
gatgatcatcaaaagcagagctcagatacagatgttggtcaggaagcaggccagttggaa
gcagatgctgaggttgacgctgcaatgattgatggagagacagatgcggatgttgattta
gatgcagttggctga

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