Quillaja saponaria (soapbark tree): O6P43_029728
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Entry
O6P43_029728 CDS
T09778
Name
(GenBank) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03013
Nucleocytoplasmic transport
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_029728
09122 Translation
03013 Nucleocytoplasmic transport
O6P43_029728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_029728
03041 Spliceosome [BR:
qsa03041
]
O6P43_029728
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
O6P43_029728
Spliceosome [BR:
qsa03041
]
Complex C
Other components
EJC/TREX
O6P43_029728
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
O6P43_029728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Herpes_UL92
Motif
Other DBs
NCBI-ProteinID:
KAJ7949389
UniProt:
A0AAD7L0L4
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All DBs
Position
12:10752927..10766847
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AA seq
604 aa
AA seq
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MEVFKRAILQPGPPETFALQTVQEVIKPQKQTKLVQDENQFLENILRTLLQELVSSSVQS
GEQIMEYGQSIDDRETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCED
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSALNIKGVFNTSNETKYEKEPPHGISIDFNFYKTFWSLQEYFCNPTSLSLAPAKWQKFT
SSLLVVLSTFEAQPLSDEEGDANNFEEESANFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKSDKDVPSESMKEEIQSCEERVKKLLEMTPPKGKEFLHKIEHILEREKN
WVWWKRDGCLPYEKQPTEKKVVQDGAKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
QTPSIMEYWKPLAEDMDASAGIEAEYHHKNNRVYCWKGLRFAARQDLEGFSRFTDHGIEG
VVPLELLPPDVRSKYQAKPNERSKRAKKEETKGAAHQAEDNQITIPSSEIDGEGIRGGVS
AAMEFDATAIPGTQGGTSTPDDHQKQSSDTDVGQEAGQLEADAEVDAAMIDGETDADVDL
DAVG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgttcaagagggccatattgcagcctggtccacctgaaacttttgctttacag
acagttcaagaagttataaagcctcagaaacaaacaaagttggtccaagatgagaaccag
ttcttggaaaatattctaaggacgctgcttcaggaacttgtgtcatcttcagtacagtca
ggggagcaaataatggagtatggacaatcaattgatgatagggagacaactcagggtcat
attcctcgtcttcttgacatagtgttgtatctttgtgagaaagaacatattgaaggtgga
atgatttttcagctgttggaagacttgacagaaatgtctacaatgagaaactgcgaagat
atttttggttatatagagagtaagcaagatatattaggaaagcaagagctttttgctcgt
ggaaaacttgtgatgctgagaacctgcaatcaacttcttcgccgtctgtcaaaggctaat
gatgtggttttctgtggacgaattctcatgtttttggctcacttctttccattgtctgaa
cgttcagctctaaatatcaaaggtgtttttaacacatcaaatgaaacaaagtacgagaaa
gaaccccctcacggaatatctattgatttcaacttttataagactttttggagcttacag
gagtacttttgtaaccctacttctttaagtcttgctccagcaaagtggcagaaattcact
tccagtttattggttgtattgagtacctttgaagcgcaacctttaagtgatgaagaaggt
gatgctaataattttgaggaagagtcagctaatttcagcataaagtatcttacaagcagt
aaactaatgggcctagagttaaaagatccaagttttcgacgccatgtccttgtccaatgc
ctcatattgtttgactatttaaaggcccccgggaaaagtgacaaagatgtaccgtctgaa
agcatgaaggaagagatacaatcatgtgaggagcgtgtaaaaaagcttcttgaaatgact
ccacccaaagggaaggagtttcttcataaaattgagcatatattggaacgggagaaaaat
tgggtatggtggaaacgtgatggttgcctgccatatgagaaacaaccaacagagaagaaa
gtggtgcaagacggagccaagaagcgtaggccaagatggagactaggaaataaagaactc
tctcaattgtggaagtgggcagatcagaatccgaatgctttaactgatcctcaacgtgtt
caaactccttctattatggagtactggaaacccttagctgaagatatggatgcttctgct
ggaatagaagctgaatatcaccacaaaaataaccgggtttattgttggaaaggtcttaga
tttgctgcccgacaggacttggagggattttctagatttactgaccatggaatcgaaggg
gtggtaccattggaacttttgccacctgatgtccgctccaaataccaagcaaaaccaaat
gaaaggtccaaacgtgctaaaaaggaagaaacaaaaggtgctgcacatcaggcagaggat
aatcagattacaataccttcaagtgaaatagatggtgaaggaatcagaggtggtgtttca
gcggcaatggaatttgatgccactgctattcctggtacccaaggtggcacttcaacgcct
gatgatcatcaaaagcagagctcagatacagatgttggtcaggaagcaggccagttggaa
gcagatgctgaggttgacgctgcaatgattgatggagagacagatgcggatgttgattta
gatgcagttggctga
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