Quillaja saponaria (soapbark tree): O6P43_029835
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Entry
O6P43_029835 CDS
T09778
Name
(GenBank) Transcription initiation factor IIF subunit alpha like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_029835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_029835
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
O6P43_029835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7949507
UniProt:
A0AAD7L176
LinkDB
All DBs
Position
12
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AA seq
538 aa
AA seq
DB search
MSIDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYECGATVTRLIREYN
VRASPSTDKNYFIGRFVTGLPDFSKKKSAENKWSLHKEGPQGRQLTEALREKYKNRPWLL
EDETGQSQYQGQLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYRQLTLEEAEEKM
VNRKKTAEGYQRWIMKAANNGSAAFGQVEPPDDKEAVKGGGKGRKKTGNDDEGNVSDRGE
EDEEQEAARKNRLGLNKRAGDDDDEGARGGDHDMDDDDIEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPEVPAPPEIKQDEDDENEDNEEEGGLSKSGKELKKLLGRTGGLNDSDADDD
DDDEEMDDETFSSVLAPKQKDAPKEEPADNSPLKPAPSGPSRGTPPTSKSAKGKRKLNGE
EAKASNGAPPKKVKTENELKSVKEESVPIPKSTTPSKGTPPPSSSKSGASSTASGPVTEE
EIRAVLMQKTPVTTQDLVAKFKARLRSPEDKTAFAEILRRISKIQKTNGSNFVVLRDR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgacctactgttgaagccttcatgtagtggatgtggatcaagtacagatttg
tatggaagcaattgcaagcacatgaccttgtgcctgacctgtggcaaaaccatggccgag
aacaaaggaaaatgctatgaatgtggtgccacagtcactcgcttgattcgagaatataac
gttcgagcaagtcccagcactgataagaactacttcattggaagatttgtgactgggttg
cctgatttttcaaagaagaaaagcgctgaaaacaagtggtctttgcataaggaagggcca
caggggcgccaacttactgaagccttgcgggagaagtacaagaacagaccttggctcttg
gaagatgaaacaggtcagtcccagtaccaaggtcaacttgaaggggcacagtcagcaact
tactacctactaatgatggaaaggaaagagtttgtagctattcctgctggttcttggtac
aactttaataaggtcgcacaatataggcaacttactttggaggaagcagaagagaagatg
gttaatagaaagaaaactgcagaagggtatcaaagatggataatgaaagcggcaaataat
ggatctgctgcatttggtcaagtagagccacctgatgacaaggaggctgttaagggaggt
gggaaagggcgcaaaaaaacaggtaatgatgatgaaggaaatgtctctgataggggggag
gaggatgaagaacaagaggcagctagaaagaacagacttggtctgaataaaagagctggt
gatgatgatgatgaaggtgcaagaggaggggatcatgatatggatgatgatgatattgag
aaaggagatgattgggagcatgaagagattttcactgatgatgatgaagctgttggtaat
gatcctgaggaacgggaagatttggctcctgaagttcctgctcctccagaaatcaagcag
gatgaggatgatgagaatgaagataatgaagaggaaggaggtctgagtaaatctggaaaa
gaactaaagaagctgcttggtcgaactggcggtcttaatgattctgatgcagacgatgac
gatgatgatgaggagatggatgatgagactttttcctctgtgttggctccaaaacagaag
gacgcacctaaggaagaacctgctgataacagtcccctgaaaccagcgccttctgggcct
tctcgaggaactccacctacctctaagtctgcgaagggaaaaaggaaattaaacggtgaa
gaagcaaaagcttcaaatggtgcacctccaaagaaagtgaagacagaaaatgaactgaaa
tcagttaaggaggaaagtgtacctattcctaaaagtactactccttctaaaggtacccca
ccaccatcgtcatcaaaatcaggagcatcaagcacggcttctggtcctgtcactgaagaa
gaaatcagggctgttttaatgcagaagacaccagtgacaacacaggatcttgttgctaaa
tttaaggcgagattgagatccccagaggacaagacagcgtttgctgaaatactaaggaga
atctctaaaatacagaaaactaacgggtccaactttgttgtgctgagagacagataa
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