Quillaja saponaria (soapbark tree): O6P43_030262
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Entry
O6P43_030262 CDS
T09778
Name
(GenBank) DExH-box ATP-dependent RNA helicase
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_030262
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O6P43_030262
Spliceosome [BR:
qsa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
O6P43_030262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
DUF5965
PhoH
Motif
Other DBs
NCBI-ProteinID:
KAJ7945154
UniProt:
A0AAD7KST9
LinkDB
All DBs
Position
13
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AA seq
1171 aa
AA seq
DB search
MNSNSILSARKPSSSLTFLIPTYKASLLLPQLLLPSQTLGFLRTSSNSLKFQISFKSPGS
VFPVDPHLSDADEYEDEEVEDDDEDDDDVAADEYDDISGDVSDGVMSGDEESEMSLAGTT
QHEVPKWKRVEKLLDEVKQFGEEIVDVDELASIYDFRIDKFQRLAVEAFLRGSSVVVSAP
TSSGKTLIAEAAAVATVARGKRIFYTTPLKALSNQKFREFRDTFGNSNVGLLTGDSAVNR
DAQVLIMTTEILRNMLYQSVGNVSSGSGLFCVDVIVLDEVHYLSDISRGTVWEEIVIYCP
KEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSMKTCLLPLLDEKGT
RMNRKLSLNYLQLHSSRVKPYKEDWSKRRKSRKHGSDTSYDNIGSISEQPPLSKNGINAI
RRSQVPQVIDTLWHLKARDMLPAIWFIFSRKGCDAAVQYVEDSKLLDECETSEVELALKR
FRLQYPDAVRETAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINM
PARTSVISSLSKRSDGGRIRLSSNELLQMAGRAGRRGTDKSGHVVLVQSPYEGAEECCKI
LFAGLEPLVSQFAASYGMVLNLLAGAKVTNRSKESDEFLAGRTLEEARKLVEQSFGNYVG
SNVMLAAKEELDKIQKEIEVLTSELSDEAIDRKSRKTLSQPSYKEIMDLQEELRAEKRVR
TELRKQMESRRISALKPLLKESESGQLPFLSLQYKDSEGVQHSVPAVFLGRVDSLNGSKF
ETMVFSDDSFSLNVVGEESVAGSKFNTDIEPSYYAALGSDNSWYLFTEKWIRTVYRTGFP
NVALAQGDALPREIMGMLLDKEEMKWDKLCDSELGGLWSMEGSLETWSWSLNVPVLSSLS
ENDELLQKSQEYHDAVELYKQQRTKVARLKKKISRTEGFKEYKKILDTAMFTEEKIKRLK
ARSKRLNNRINQIEPSGWKEFLQVSNVIHETRALDINTHVIFPLGETASAIRGENELWLA
MVLRNKILLNLKPAELAAVCASLVSEGIKVRPWKNNSYIYEPSATVINIINFLDEQRSTF
LHLQEKHRVTISCCLDSQFCGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLAQI
PKLPDIDPLLQSNAMTASNVMDRPPISELAG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaattctatcctctcggctcggaaaccttcttcgtctctaactttccttatt
ccaacctacaaagcctctctgttactccctcaacttcttcttccttcccaaaccctagga
tttcttcgcacttcttcaaattcactgaaattccagatctccttcaagtccccaggctca
gtcttccccgttgatccccacctctccgacgccgacgaatacgaagacgaagaagtagaa
gacgatgatgaagacgacgatgatgtggctgccgatgaatatgatgacatttccggtgat
gtgtcggacggcgtcatgtcgggcgatgaagaaagtgaaatgtctttggccggaaccaca
cagcacgaggtacccaagtggaagagagtggaaaagcttctcgatgaagttaagcagttt
ggcgaggaaatcgttgacgtcgatgaacttgcttcgatttacgatttccgaatcgataaa
tttcagcgattggcagtagaagcattcttgagaggttcatcggttgtggtttctgcgcct
accagcagtggtaaaactttgattgctgaagctgcggctgtggcaacagtagctagagga
aagcgaatattctatacaaccccactcaaggcattgtctaatcagaaatttcgcgaattt
cgtgatactttcggcaatagcaatgttggccttctcacaggtgattctgctgtcaacaga
gatgctcaggttttgattatgactacagaaatactacgcaacatgttgtatcagagtgtt
ggcaatgtttcttctgggagtggacttttctgtgttgatgtgattgttttggatgaagtt
cattacttaagtgacatatctcgcggcactgtttgggaagagatcgtcatttattgcccc
aaagaagttcaacttatatgtctgtcagctactgttgcaaatccagatgagctggctggt
tggattggtcagattcatggtaaaactgagttggtaacatcatcaaagcgcccagttcca
ttaacttggcatttctctatgaagacttgtttgctacctcttcttgatgagaaaggcaca
cgcatgaataggaagctgtcactcaattatttacaacttcattcttcacgagttaaaccg
tacaaggaggattggtctaaaagaaggaagtcgagaaaacatggaagtgatacgagctat
gataatattggtagcatctctgaacaaccccctctttcaaagaatggcataaatgcaatc
cggcgttcgcaagttccccaagttattgatactttatggcaccttaaggcaagggatatg
ctaccagctatttggtttatctttagcaggaaaggttgtgatgcagctgtgcaatacgta
gaagatagcaagctcttggatgagtgtgagacgagtgaggttgaactagccttgaagaga
ttccgtcttcagtatcctgatgctgtcagggagacagctgtaaaaggacttctgcaaggg
gttgctgcacatcatgctggttgtttacctttgtggaagtcattcatagaagaattattt
caacgaggacttgtgaaggttgtctttgccacagagacccttgctgctggaattaatatg
cccgcaaggacatctgtcatttcatccctcagcaaaaggagtgatggtggacgtatccgt
ttgagctcaaatgaactgcttcaaatggctgggcgtgctggacgtagaggcactgacaaa
agtggtcatgtagttctggttcagtctccttatgaaggagctgaagagtgttgcaagatt
ctatttgctggacttgaacctcttgtatcacagtttgctgcttcatatggaatggttttg
aatcttcttgctggtgcaaaagtcactaatagatcaaaggaatcagatgagtttctagca
ggtagaactttggaagaagctaggaagttagttgagcagagttttgggaattatgttggt
agcaatgtcatgctggctgcaaaagaggaactcgataagatacagaaagaaattgaggtg
ctgacttcagaacttagtgatgaggccatagataggaaaagcaggaagactttgtcacag
ccatcgtataaggaaatcatggatttgcaggaagagttaagggcagaaaaacgtgttcgt
actgaacttcggaaacaaatggaatcaaggagaatttctgctctgaaacctttgttaaag
gagtctgaaagtggacagttgccctttttgagcttgcagtataaagattctgaaggagtt
cagcattcagttcctgctgtatttttggggagagttgactcccttaatggttcaaaattt
gagaccatggtcttttctgatgattctttttcattaaatgttgtaggagaagaaagtgtt
gctggctctaaatttaatacagatattgaaccatcatattatgctgctcttggttctgat
aactcctggtatttatttactgaaaagtggatcagaacagtgtataggactggctttccc
aatgtagcattagctcaaggggacgctttgccccgggaaattatgggtatgcttcttgat
aaggaggagatgaagtgggataagctttgtgattctgaactcggtggtttatggagcatg
gaaggatctctcgagacatggtcttggagtttaaacgttccagtattgagcagtctttct
gaaaatgatgagctgctacaaaagtcacaggaatatcacgatgctgttgaactttacaag
caacaacgaactaaagttgctcgcttgaagaaaaagatatcacgaactgaaggcttcaaa
gaatataagaaaatcttagacacggcaatgttcacagaagaaaaaatcaaacgcctgaag
gctagatcaaaacgcttgaataatagaataaatcaaattgagccatctgggtggaaggaa
tttttacaggtcagcaatgtcatacacgaaactagggcattggatatcaatacacatgtt
atctttccccttggtgaaactgcaagtgcaattcgaggagaaaatgaactctggcttgca
atggttcttcgaaataaaattttgctaaacctgaagcctgctgagcttgctgcagtatgt
gcaagtttggtttctgagggtatcaaagttcgcccgtggaaaaataacagctatatttat
gaaccttctgcaactgtgatcaatatcatcaatttcttggatgagcaaagaagcaccttc
ttacatcttcaggaaaaacatagggtaacgatatcttgctgtttggatagccaattttgc
ggtatggttgaggcttgggcttctgggttaacctggagggagatgatgatggattgtgca
atggatgagggagatctagctcggctccttcggcggactattgatctattagctcagatt
ccaaaactgcctgatattgatccactgctgcaaagtaatgcaatgactgcatctaatgtg
atggaccggccgccaataagtgaactggcggggtag
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