Quillaja saponaria (soapbark tree): O6P43_030308
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Entry
O6P43_030308 CDS
T09778
Name
(GenBank) DNA polymerase
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03030
DNA replication
qsa03410
Base excision repair
qsa03420
Nucleotide excision repair
qsa03430
Mismatch repair
qsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O6P43_030308
03410 Base excision repair
O6P43_030308
03420 Nucleotide excision repair
O6P43_030308
03430 Mismatch repair
O6P43_030308
03440 Homologous recombination
O6P43_030308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsa03032
]
O6P43_030308
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_030308
Enzymes [BR:
qsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O6P43_030308
DNA replication proteins [BR:
qsa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
O6P43_030308
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
O6P43_030308
MMR (mismatch excision repair)
DNA polymerase delta complex
O6P43_030308
BRITE hierarchy
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
NOB1_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
KAJ7945210
LinkDB
All DBs
Position
13
Genome browser
AA seq
1089 aa
AA seq
DB search
MKNGSTRKRPSPAAAGPSPAPPTKNQAFSQEEEFVDEDVFLDETLVFEDEESLILRDIEE
RQALASRLAKWNRPPLSSDYISQSRSIVFQQLEIDYVIGESHKELFPNSYGPAAIIRIFG
VSKEGHSICCLAHGFEPYFYISCPPGMGPDDISSFHQILEGRMREVNRNSNVPKFVRRIE
LIQRRSIMYYQQQSSHPFLKIVVALPTMVASCRGILDRGIHIDGLGMKNFMTYESNVLFA
LRFMIDCNIVGGNWIEVPAGKYKKTSKTLSHCQLEFDCFYSELISHAPEGEFSKMAPFRI
LSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEDQPLIRNVMTLKSCSPIVGVDVMSFD
TEREVLLAWRDFIRQVDPDIIIGYNICKFDLPYLIERAETLKISEFPLLGRIKSSRVRVK
DTTFSSRQYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHS
IISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQS
IKVLSQLLRKAKQKNLVIPNVKQVGSEQGTYEGATVLEAKAGFYEKPIATLDFASLYPSI
MMAYNLCYCTLVTPEDVRKMNLPPEYVNKTPSGETFVKPNLQKGILPEILEELLAARKRA
KADLKEVKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEH
TKKLVEDKFTTLGGYEHTAEVIYGDTDSVMVQFGVPSVEEAMNLGREAAEYISGTFTKPI
RLEFEKVYYPYLLISKKRYAGLFWTTSDKFDKMDTKGIETVRRDNCLLVKNLVTECLHKI
LIDRDIPGAVLYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRD
AATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQISKPLLRIFE
PILKNASKELLHGSHTRSISISTPSNSGIMKFAKKQLSCISCKAILSNTDRTLCSHCKGR
EAEFYCKTVSQVSELEVLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA
RLQLDRWNF
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggcagtacacggaaaaggccatctccggcggcggctggaccctcaccggct
cccccaaccaaaaaccaagcattttcccaagaagaagaattcgtagatgaggacgtcttc
ctcgacgaaacccttgtctttgaagacgaagagtccctcatcctccgtgacattgaggaa
cgtcaggcccttgcgtctcgtcttgctaagtggaatcgcccgcctctctcgtctgattat
atttcacaatctcgaagcatcgtttttcagcagctggagatcgattacgtgataggagag
agtcataaagaactgtttcccaattcttatgggcccgctgctattatcagaatattcggg
gtttcaaaggaaggacatagcatttgctgccttgctcatgggtttgagccatatttctat
atcagctgccctccaggaatgggtccagatgatatatccagttttcatcaaattcttgag
ggaaggatgagggaggtcaacaggaatagcaatgtgccaaaatttgtccgtcgtattgaa
ttgattcagagacgtagcattatgtactaccagcagcagagttctcatcccttcctaaaa
attgtagtggcattgccaacaatggtagccagctgccgtggtattcttgatagaggtata
catattgatggtcttggaatgaagaacttcatgacctatgaaagcaatgtgctctttgcc
ctccgtttcatgattgattgcaacatcgttggtggcaattggattgaagtacctgctgga
aaatataagaagacatcaaaaactttatctcactgccagttagagtttgattgcttctac
tcagagttgattagtcatgccccagaaggggaattttcaaagatggctccatttcgcata
ttaagttttgatattgagtgtgctggccgtaagggtcattttcctgagccaacccatgat
cctgttatccaggttgccaatctggttactttgcaaggagaagaccaaccacttatccgt
aatgtcatgacccttaaatcatgctctcctatagttggggttgatgtgatgtcatttgat
acagaaagagaagttttgctagcttggagggattttatacgccaagtggatcctgatatt
ataattggatataacatttgcaaatttgacttgccatatctcattgagagagccgagact
ctaaaaatatcagaatttccattacttggccgcatcaagagtagcagagttcgagtcaaa
gatacgactttttcgtcaagacagtatgggaccagggaaagcaaagaggtgacagtggaa
gggagagttcaatttgatttgctccaggtgatgcaacgggattacaaattaagttcttac
tcattgaattctgtctcagcacattttctttctgagcagaaagaggacgtccaccactca
atcatatctgatcttcagaatggaaatgcagaaactaggaggcgtcttgctgtgtattgt
ttgaaggatgcttatctccctcagcgtcttttggacaaattgatgtttatttacaactat
gtggagatggctcgagtaacaggagttcctatttcctttttactttctagagggcaaagc
attaaggtactctcacaacttcttaggaaggcaaaacagaaaaatctggttattcctaat
gtcaaacaggtgggctcagaacaagggacatatgaaggtgccacggttttggaggccaag
gctggattctacgaaaagccaattgctactctggattttgcatccttgtatccatctatt
atgatggcatataatttatgttactgcactctggtgacccctgaagatgttcgtaaaatg
aatctgcctccagaatatgttaacaaaactccttctggtgaaacatttgttaaaccaaat
ttgcagaagggaatacttcctgaaatccttgaagaactcttagctgcacgtaaaagagca
aaagcagatttgaaggaagtgaaagatcctcttgagaaggctgtgctagatggtcgtcaa
ttggctttgaaaataagtgcaaattctgtatatggatttacaggagcaactattggtcag
ttaccatgtttggagatatcttcaagtgttactagctatggtcgacaaatgatcgagcac
acaaaaaagcttgtggaagataaatttacaacacttggcggctatgaacacactgctgag
gtgatatatggggacacagattcagtcatggtacagtttggtgtgccttctgtggaagag
gcaatgaatttggggagagaagctgctgagtatattagtggaactttcacgaaacccatc
agactggagtttgagaaggtttattatccatatcttctgattagcaagaaaagatatgct
ggtttattttggaccacatcagacaagtttgacaaaatggatactaaaggtattgaaaca
gtgcgaagagacaattgtttattggtaaaaaacttggtaactgagtgccttcacaagata
ctcattgacagagatattcctggggcagtgctgtatgtgaagaataccatttcagatctt
cttatgaatcgtatggatttgtcacttttggtcatcactaagggtttgacaaagacagga
gatgattacgaagttaaggccgctcatgttgaacttgctgaaaggatgcgcaagcgagat
gctgctactgctccaaatgtgggggatcgagtaccttatgtcattattaaagctgcaaaa
ggtgctaaggcttatgaaaagtccgaggatcccatatatgtgctagagaacaacatacca
atagaccctcaatactatcttgaaaatcaaattagcaagccactactaagaatttttgag
cccattttgaagaatgctagcaaggaacttctccatggcagccacacaagatctatctct
atttctactccatcaaacagtggcataatgaaatttgctaagaaacaactcagttgcatt
agctgcaaagctatactcagcaatacagatcgcactctctgctcacactgcaagggaaga
gaagctgagttttactgcaagacagtgtcacaagtttctgaactggaggtactttttggg
aggctgtggacacaatgtcaagagtgccaaggttctcttcaccaggatgttctctgcaca
agtcgggactgtccaatattttatcggcgaaagaaggcacagaaagacatggctgaggca
aggctgcaattagatcgatggaacttctaa
DBGET
integrated database retrieval system