Quillaja saponaria (soapbark tree): O6P43_030626
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Entry
O6P43_030626 CDS
T09778
Name
(GenBank) GYF domain-containing protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_030626
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
O6P43_030626
Surveillance factors
Other surveillance factors
O6P43_030626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-ProteinID:
KAJ7945585
UniProt:
A0AAD7P8E4
LinkDB
All DBs
Position
13:complement(2267263..2276687)
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AA seq
1461 aa
AA seq
DB search
MAKSKLDLPDDLLSSKLSDHSWTPKEASGGSDERKVLVGLLDEPKDQAVTESSIPLSPQW
LYAKSSETKMEVRLPTSVSLGSSSPSTRKEVWRLDGSEDKKDWRRSANDVENGRRWREEE
RETGLLGSRRDRKKAERRVENVTTRETVDSRALPTSERWHDGRSSGHETRRDSKWSSRWG
PEDKEKETRAERKTEVEKEDAFIDDQSVVGTNRPNSDRESDSRDKWRPRHRMEAHPGGST
SNRAAPGFGLERGRMEGSSSGFSFGRGRPNVIGRLSSAGLVGGSFLTFIACKSLIHCFLQ
CQMRWRNHYQLLKLALLDHWPLFILMLKSRPFLTIYGEGRLQVVGVASNSSSKGKLTENF
SGAEDSESTEGNQGSASAHSYQANDNVSKDNGIYFSKETNEPYHRTSQLETSKYWQMMDT
ASAKFTQSDYTESADSYDIKCMLPNSSNSLFVAPNPEQSRSGNTDTKDSKVAVPPESLSL
YYLDPQGVTRGPYLGGDIITWFEQGFFGTELPVRLEDAPEGAPFQDLGEVMPHLQARARF
IDDIGSNFEQFGSLGEMLEANLPASAPNPESNLFMVNDLGQSLPEFNSLSSRHFHSKTSE
PEAPLQLLQSEDQTSQDFTARDEENVFPRRTGNSGYKSSGKIHENTSRHVSLPNEMREPS
LLYEVDNKLHPFGLLWSELEAARTQHVKSSNMSSSMGRPSQFGLMPDPGFVTETRSKLNR
KGAPELYQNAQSAHLFAYMEPETNRNDLLEQLMTHTFQQQQQLQQQKLSSPRSNLNESLL
EHAASQNLVYQQQLANRSTPDMEHLLMLKLQQERELQLQQHHEHLLQQKKLLQEQQQSQV
QQLLLEQFLHGQSHIPGLRQSEVDAMRTNNVLNQVLLEQRLIHEMQQQSHQIPSHVDPSL
EHLMQANFQATQEHQRDLSELLSHSHHGQMQSLEHQIIQEEQARHLSMGMRKRNNMNGER
NIGSVWPDNEAHPFLRTHAGSHREHSSEFGSLDYYQQQQRASQDNQLNFLERNLSLQDQL
QKGIYKPGALPFERSVSFPAGVSGMNLDVLNAMSHAHGLEMQESTRNFPSPGQVATFSSS
IYPHSSHHPSISNEEHLENEWIDSRFQQLHINSEQKKQELEAEVASEVQTLWMSDGLNDE
KSKHLLMELLHQKSGHQHSELLNASNGKPFGRRESFGPFSRSSSSDHPFNLPQDQGLGLN
SSFAAGSFGQPDEQTICSRHEKLAFRSNSDGLVEGNSLFSGFKETELGKHNSNRDCMTKG
LSAEILEGAVDQARFEAVNRGDISLNSLIRHHSLGVTGEKACFYNNEIMPSNSFAEEIAK
DRIVYEGVPIPSKSQENVLSRRPPLPRTSSSQEVLSDLVSDPINRGKDSFTGASEEVRRD
IVGNLADVSEASFIDMLKSNGKKTAQPETQATGVVESSDGNQGSRGGKKKGKKGRQIDPT
LLGFKVTSNRILMGEIQRMDD
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagtaagctcgatctacctgacgatcttctttcttctaaattatccgatcat
tcttggacacctaaagaagcttcgggaggaagtgacgagagaaaagtgcttgtagggctg
cttgacgagccaaaagatcaagcagtaacagagagcagcattcctttgtctcctcagtgg
ctttatgcgaaatcaagtgaaactaagatggaggtgcgtttgccaacttcagtgtctctt
ggaagctccagtccttccactaggaaggaggtttggcgtttggatggatctgaggacaaa
aaagactggcggagaagtgctaatgatgttgaaaatggccgtcgttggcgtgaagaagaa
cgggaaactggtttacttggtagcagaagagaccgcaagaaagcagagcgtcgtgtagaa
aatgttacaacaagagaaacagttgacagtagagctctgcctacctctgagaggtggcat
gacggccgaagctctggtcatgaaacacggcgtgacagcaaatggtcatctagatggggt
cccgaagacaaggaaaaggaaaccagggctgagaggaagacagaggtggagaaggaagat
gcttttattgatgatcaatctgtagtgggcaccaatcgtccaaattcggatcgcgagtca
gactctcgtgataaatggaggccacgccatagaatggaggctcaccctggaggatcaact
tcaaaccgagctgcacctggatttggacttgagagaggacggatggagggctcgtcttcg
ggatttagctttggacgaggacgacctaatgttattgggagactttcgtctgcaggcctc
gttgggggaagcttcttgacatttatcgcatgcaaaagcttgatccactgttttctacaa
tgccagatgagatggaggaatcactaccaattactcaagttggccttactggaccattgg
cctttgttcatcctgatgctgaagagcagaccattcttaaccatatatggggagggaagg
ttacaggtagtgggggtagcaagtaattcatctagcaaggggaaattaactgaaaacttc
tcaggtgctgaagactcagaatctaccgagggaaaccagggtagtgccagtgctcattca
tatcaagctaatgataatgtttcaaaagacaatggtatctacttcagcaaggagacaaat
gaaccttaccatcgtacatctcaacttgaaactagcaaatactggcaaatgatggatact
gcttctgctaaatttactcagtctgattacactgagtctgctgattcttatgacatcaaa
tgcatgctgcccaattcttcaaattctctatttgttgcacctaatcctgagcagagtcgg
agtggcaatacagacacaaaagacagtaaagttgctgtacctcctgagtcgttaagtttg
tactaccttgatcctcaaggggtgacccgtggaccatatcttgggggtgacattattaca
tggtttgaacaaggtttttttggaactgagttgccagtccggctggaagatgccccagaa
ggagctcctttccaagatctgggtgaggttatgccacatctgcaagcaagggccaggttc
attgatgacatagggtcaaattttgaacaatttggttccttgggagaaatgctggaggct
aatttgcctgcttcagctcccaatccagaaagtaatctatttatggtaaatgaccttggc
cagtcactgcctgaatttaacagtctttcttctcggcattttcactcgaaaacatctgag
cctgaagctccattgcaactgctacagtctgaggatcaaacttctcaggattttactgca
agagatgaagaaaatgtattcccacgaagaactggaaactctggctataaatcttctggg
aagattcatgaaaatactagtagacatgtttctcttccaaatgaaatgagagaacctagt
ctgctatatgaggtggataataagctgcacccctttggattgctttggtctgagcttgaa
gctgctcgtacgcaacatgtgaagtcttctaatatgtcatccagcatgggtaggccttcc
cagtttggtctcatgcctgatccaggttttgttactgaaacaaggtccaaacttaataga
aagggtgcgcctgaattgtatcaaaatgctcaaagtgctcacctatttgcatatatggag
cctgagaccaaccggaatgatctattggagcaacttatgactcatacttttcagcaacaa
cagcagctccaacaacagaagttatcttctcctcgttcaaacttgaatgaatcacttcta
gaacatgctgcaagtcagaatctagtctaccagcaacagttggccaaccgttctactcca
gatatggaacatcttttgatgctcaagctgcaacaggagcgagaactccagcttcaacaa
catcatgaacatcttcttcaacagaaaaagcttttgcaggagcaacagcaatctcaagtc
caacagctgcttcttgaacagttcctgcatggtcaatcgcatattcctggtcttaggcaa
tctgaagttgatgctatgagaaccaacaatgttctgaaccaggttttgttagaacagcgc
cttatacatgaaatgcaacaacaatctcatcagataccaagccacgttgatccatccctg
gagcatcttatgcaagcaaattttcaggcaacacaagagcatcaacgagatttgtcagag
ctactatcacattcacatcatggacaaatgcaatctttagagcatcaaattattcaagaa
gagcaggcgagacatttatcaatgggaatgaggaagcggaataacatgaatggcgagagg
aatattggttctgtgtggccagataatgaggctcatccatttctgaggactcatgctggc
tctcatcgagaacactcttcagaatttggttctttagattattaccagcaacaacaacgg
gcatcacaggacaatcagttgaatttccttgagcggaatctctcattacaagaccagtta
cagaaagggatttacaagcctggagcactgccatttgaacgttccgtatcttttcctgct
ggtgtatcagggatgaatctggatgtcttaaatgctatgtctcatgctcatggtttagag
atgcaggagtcaactaggaattttccgtctcctggtcaagtggcaacattttcgtctagc
atttatcctcatagttctcaccatccatcaatttcgaatgaagagcatctcgaaaatgag
tggatagattctcggtttcaacaattgcatatcaattctgaacagaagaaacaggagtta
gaagctgaagtggcttctgaagttcaaactttatggatgtcggatggtctcaatgatgag
aaatcgaagcatttactgatggaattgctccatcagaaatcaggccatcagcattctgag
ctactgaatgccagcaatgggaaaccctttggaagaagggaatcatttggtcccttttct
aggtcaagctcttcggatcaccctttcaatctcccccaagatcagggattaggtttaaac
tcgtcatttgcagcgggttcatttggtcagccagatgagcagaccatctgttcgagacat
gaaaaactagcatttagatccaacagtgacggtttagttgaggggaattcattattctcc
ggcttcaaggagaccgaacttgggaagcataattccaatagagattgtatgacaaagggt
ttatctgctgagattctagaaggcgctgtagatcaagcacgatttgaagctgttaaccgt
ggagacatttcattgaattcccttatcaggcaccattcgcttggtgttacaggtgaaaaa
gcttgcttttataacaatgagattatgccatcaaattcatttgcagaagagattgctaag
gaccgcatcgtgtatgagggggtgccaataccatccaaaagccaagagaatgttttgtca
agacgtcccccattacctcgcacttcatcttctcaggaagtattgtctgatctggtctcg
gatccaattaacagaggaaaggattctttcactggtgcttcagaagaggtaagaagagat
atagtgggaaatctagcagatgtgtcagaggcatcatttattgacatgctgaagagtaat
ggtaagaagactgctcaaccagagactcaagcaacaggagttgtagagtcatcagatgga
aaccaagggagccggggtggcaaaaagaaagggaaaaaagggaggcaaatagatcctact
ctccttggcttcaaagtaaccagtaaccgtatcctgatgggtgaaattcagcgcatggat
gattag
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