Quillaja saponaria (soapbark tree): O6P43_030832
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Entry
O6P43_030832 CDS
T09778
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_030832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_030832
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_030832
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_030832
Spliceosome [BR:
qsa03041
]
Complex A
U1 snRNP components
U1 related factors
O6P43_030832
Complex B
O6P43_030832
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Pre-60S particles
Helicases
O6P43_030832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
KAJ7945823
UniProt:
A0AAD7P831
LinkDB
All DBs
Position
13
Genome browser
AA seq
714 aa
AA seq
DB search
MNPYEQRYADTNSYRERRSDLVGPTQAIPPRLGAGVGGASSYGRGGPVPYGSGRPSVGYT
GGGRGGGSLGSAPVASELNGYPPFMPPPGGSFDIGRVDGVSERGFSSGSGFNGRMTNSRV
GDRRGDIGHSGRGRGSGGRGRGLDFGRGGGRFGGTPGDRTFEGGRVGGRSGGRMGFTRGR
GGGGRGFDSRGGVSGRGGRHGGSSRGDLDNITLPHQDFGNVVPFEKNFYIESPSVRVMSE
HEVMLYRASRDITVQGHDVPRPIRMFQEANFPDYCLEVIARSGFIEPTPIQAQGWPMALK
GRDMIGIAETGSGKTLAYLLPALVHVSAQPQLVQGEGPIVLILAPTRELAVQIQEETVKF
GSQSNIKSTCIYGGAPKGPQIRDLRKGIEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEA
DRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVETLARQFLHNPYKVIIGSPDLKAN
QSINQVVEVVTDIEKYNRLIKLLREMMDGNRILIFMETKKGCDQVTRQLRMDGWPALSIH
GDKNQAERDWVLAEFKSGRSSIMTATDVAARGLDVKDIKCVINYDFPSSLEDYIHRIGRT
GRAGATGTAYTFFTHANAKFARDLIKILQEAGQVASPALQGMARSAGYGLLGNSFTVWDS
YKEVVLLDKQNLVYSIVVGSGGNFRARGRGGYGYGNRGQKSGSNTIPLGAKRPW
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttatgagcaaagatatgctgacacgaactcatatcgtgagcgtcgtagtgat
ctagttggacctacacaagctataccgccaaggcttggtgctggagtaggtggtgcttcg
agctatggccgtggtggaccagttccttatggaagtggtcgtccttcggttggttataca
gggggtggaagaggaggtggtagtcttggatcagcccctgttgcctctgagcttaatggg
tacccgccgtttatgccccctcctggtggaagttttgatattggccgagtagatggtgtc
agtgaaaggggtttcagtagtggcagtggttttaatggtagaatgaccaatagtcgtgtg
ggagatagacgaggcgacataggccacagtggaaggggtcgtggcagtggtggtagggga
agaggtttagattttgggcgtggtggcggtagatttggtggaacccctggtgataggact
tttgaaggaggacgggttggaggtaggagtggtggacgcatggggttcacaagggggcgt
ggtggtggtgggaggggatttgatagccgtggtggtgttagtggaagaggaggcagacat
ggtggatcatcaagaggggatttggacaatattactcttccacatcaagatttcgggaat
gtggtcccttttgagaagaatttttacattgagtccccttcggtgcgagtaatgtctgag
catgaagttatgctttatcgtgcaagccgagatatcacagttcaagggcatgacgtccca
agaccaattcggatgtttcaagaggcgaacttccctgattactgccttgaggtgatagcg
aggtcgggttttattgagcccacaccaattcaggctcaagggtggccaatggctctcaag
ggtagagacatgattggtattgctgagactggttctggtaaaaccctggcatacctgctt
cctgctttagtacatgttagtgcccagcctcaactagtacaaggtgaaggtcccattgtg
ttaattttggcacctactagagagttagctgttcaaattcaagaagaaactgtaaaattt
ggttcacaatctaatattaaaagtacatgcatttatggtggcgcaccaaagggaccccaa
attcgtgatcttagaaaaggcattgagattgttattgctacacctggtcgactgatagat
atgttggaagctcaacacacaaacctgcgtcgagtgacttatctcgtgttagatgaggct
gatcgaatgttggacatgggttttgagcctcaaattaggaaaattatatcccagatccga
ccagataggcagacattgtactggagtgccacatggccaagggaagttgaaactctagcc
aggcaatttttgcacaatccatataaggtaataattgggtcaccagatctgaaagctaat
caatctataaatcaagttgttgaagttgtgacagatatcgagaaatataatagactgatc
aaactgctcagagaaatgatggatgggaatcgaattctgatatttatggagaccaaaaag
ggatgtgaccaagttacaaggcaattaagaatggatggatggcccgctctatccatccat
ggtgataaaaaccaggctgaaagggactgggttctggcagagtttaaaagtggcagaagt
tcaataatgactgccactgatgttgccgcacggggtcttgatgtgaaggacataaaatgt
gtgatcaattatgattttccttcaagccttgaggattatatccacagaattggtcgaact
ggtcgtgctggggctacgggaactgcctacaccttcttcacacatgcaaatgccaagttt
gctagagatttaatcaagatcttgcaagaggcaggtcaggttgcaagtcctgcattgcaa
ggcatggctcggtcagctggttatggtcttttaggtaattcttttactgtttgggacagt
tataaagaagtggttttattggataaacaaaatttggtttattcaattgttgtaggatca
gggggaaatttccgagctagaggacgtggaggctatggttatggtaatcgtggtcaaaaa
tcaggatctaatactattcctctaggtgcaaagaggccttggtag
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