Quillaja saponaria (soapbark tree): O6P43_031047
Help
Entry
O6P43_031047 CDS
T09778
Name
(GenBank) Polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03015
mRNA surveillance pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
O6P43_031047
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_031047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_031047
03041 Spliceosome [BR:
qsa03041
]
O6P43_031047
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
O6P43_031047
mRNA cycle factors
Stress granule specific factors
O6P43_031047
Spliceosome [BR:
qsa03041
]
Complex C
Other components
Complex C specific factors
O6P43_031047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_7
RRM_Nup35
RRM_RdRP1_2
RRM_MARF1
PABC_AtC3H46
DUF5062
YflT
PH_35
Motif
Other DBs
NCBI-ProteinID:
KAJ7946074
UniProt:
A0AAD7KU39
LinkDB
All DBs
Position
13:complement(4616362..4622196)
Genome browser
AA seq
638 aa
AA seq
DB search
MAQVQVQPQNAISGASGVAVVGGANQFGTTSLYVGDLDPSVTDSQLYDFFNHLGQVISVR
VCRDLTTRKSLGYGYVNYSGPQDAARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGAGNI
FIKNLDKAIEHKALHDTFSAFGNVLSCKVATDSSGQSKGYGFVQFENEESAQKAIEKLNG
MLLNDKQVYVGPFLRKQERDSVIDKTKFNNVFVKNLSESTSEEDLKNVFAEFGPITSVVV
MRDGDGKSKCFGFVNFESADDAVRSVEALNGKKIDDKEWYVGKAQKKSERETELKHRFEQ
TMKEAADKYQGANLYVKNLDDSIGDDKFKELFSPFGMITSCKVMRDPNGISRGSGFVAFS
TPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQAQFAQMRPVAMPHSVAPRVPMY
PPGGPGIGQQIFYGQAPPAIIPSQPGFGYQQQLVPGMRPGGAPMPNFFMPMVQQGQQGPR
PGGRRSGAVQQTQQPVPLMQQQALPRGGRVYHYPPRRGLPDAPMPGVAGGMFSVPYEMGA
VPLRDAALSQQIPVGALASALANATPEQQRTMLGENLYPLVEQLEPENAAKVTGMLLEMD
QTEVLHLLESPEALKAKVAEAMDVLRNVAQQQTGNAAD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagttcaggttcagcctcagaatgcgatttcgggagccagcggtgtcgccgtg
gttggcggagcaaaccagtttgggacgacatcgctttatgttggggatcttgaccccagt
gtcacggattcgcagctatacgacttctttaaccatctgggtcaggtgatttctgttagg
gtttgcagggatttgacgacccggaaatcacttggttatggttatgtcaattatagcggc
cctcaagatgctgcaagggctttggatgtcctgaacttcactcctctcaatggaaagccc
atccgtattatgtattcccatcgtgatcctagcattcgtaaaagtggggcaggaaatata
tttattaagaacttagacaaggcaattgagcacaaagcattacatgatacattttctgca
ttcgggaatgtcctttcttgcaaggtggctacagattcctctggacaatctaaaggctat
ggctttgtacaatttgaaaatgaggaatctgcccaaaaagcgatagagaagttaaacggc
atgctgttgaatgataagcaagtctatgtggggcctttccttcgtaagcaagaaagggat
agtgtaattgacaagacaaaattcaacaatgtttttgtgaagaacctctctgaatcaact
agtgaagaagatttgaagaatgtttttgctgaatttggaccaatcactagtgttgtggtg
atgagagatggggatgggaaatcaaagtgctttggatttgtaaactttgagagtgcagat
gatgctgttaggtcagttgaggctcttaatgggaaaaagattgatgataaggagtggtat
gttggaaaggcccagaagaaatccgaaagagaaactgaactgaaacatcggtttgagcag
acaatgaaagaggcagctgacaaatatcaaggggccaacttgtatgttaaaaatttagat
gatagcatcggagatgataaatttaaggagttgttttcaccttttggtatgattacctca
tgcaaggtaatgcgagacccaaatggaattagcagaggatcagggtttgttgcattctca
actcctgaggaggcatctagagcactcttggagatgaatgggaaaatggttgttagcaag
cctctatatgttgcactggcacaaagaaaagaagatagaagagctagattgcaggctcaa
tttgctcaaatgcggcctgttgcaatgccgcattctgttgctcctcgtgtgccaatgtac
cctcctggtggtcctggtattggacaacaaatattctatggtcaagcaccacctgcaatc
attccttcccagcctgggttcgggtaccaacaacaacttgtacctggcatgagacctggt
ggggcaccaatgccaaatttctttatgccaatggttcagcagggtcagcagggaccacgt
cctggtggcagacgttcaggggctgtccagcagacccagcagccagttccgctcatgcaa
cagcaggctcttccaagagggggacgtgtctaccattatccccctcgccggggtctgcct
gatgctcccatgcctggggttgctggaggcatgttttctgttccatatgaaatgggtgct
gtgccactgcgtgatgctgctttgtctcagcaaattcctgtgggtgctttggcttctgcc
cttgcaaatgctacaccagagcagcagaggacgatgctgggtgagaatctttacccactt
gtggagcagctggagcctgaaaatgcggctaaggtaactggcatgcttctggagatggat
cagactgaggttctgcaccttcttgagtcaccagaagctttgaaagctaaggtggctgag
gccatggatgtcctaagaaatgttgctcagcagcagactggcaatgcagcagattaa
DBGET
integrated database retrieval system
