Quillaja saponaria (soapbark tree): O6P43_031403
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Entry
O6P43_031403 CDS
T09778
Name
(GenBank) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_031403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_031403
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_031403
mRNA degradation factors
5'-3' decay
Decapping complex
O6P43_031403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
GerPC
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
COMPASS-Shg1
DUF445
Sey1_3HB
Motif
Other DBs
NCBI-ProteinID:
KAJ7946479
UniProt:
A0AAD7KUU7
LinkDB
All DBs
Position
13
Genome browser
AA seq
1416 aa
AA seq
DB search
MASPGNPNQQQQQAGHFDVQKLFKPSTNLNSSPSFPAPSSSPPPPSSYLTPSSSYPPPTG
PYTFHPHYLPYQIHHHQQQPSQEHPHVLLHHHQQLPQMHTPQRPIYTSPSPSSPHVPSSP
NTNNSSGARLMALLSSQNPPSNLDRPQSSAPFPVSLSPPSPSAAVSELSTPTSPSVMQTT
PPATHANMTSPQTTPARLLSRKLPKGRHLMGGHIVYDIDARLPGEVQPQLEVTPITKYAS
DPGLVLGRQIAVNRSYICYGLKLGAIRVLNINTALRSLLRGHTQRVSDMVFFAEDLHLLA
SSSIDGRVFIWKINEGPDEEEKPQITGKIITSIQIAVDGESVHPRVCWHPHKQEILMVAI
ANSILKIDTTKVGKGVTFSAEEPLKCPIDKLIGGVYHIGKHDADVTELTMCQWMKSRLAS
ASTDGTVKIWEDRKSLPLAVIRPYDGRPVNSVTFLTAPHRPDHIVLITAGPLNREVKIWV
SASEEGWLLPSDDESWNCIQSLIIRSSSEAKDEDAFFNQVVALPRAGLFLLANAKKNAIY
AVHIEYGSNPAETHMDYIAEFTVTMPILSLTGTSDILPDGEHIVQVYCVQTQAIQQYALD
LSQCLPPSLDNVEFEKTDPSVSCASDASARLATLGSPTDSLTSEIPVSNATSIPPVLSSS
SESASMVRSPSTTLATSEVTSLTEVASTGKETKSNNFPFDNDAENIHTAPRPLPLSPRLS
RKFSGSRSSTNNMETSPTVVLSSDQVHVTDLGLDSQKDNKADLPSSDDSLRENDKLVAQN
DISVVSNPPATFTHPTHLVTPSEIFSTATLTSENSQISQGMNVVEAKVQDVVVNPDTDNT
ELEVKVVGETGSNQNKFNCQIESDAIRTEKREKSFYSQASDLGIQMAIDSCVGTCDLEEV
HRADDISVTDEPGLPPNIAAEDIRKDVPASVSESETPLIVSQSPAPAVKGKIQKGKGSQV
LGPSPSQSPFNSTDSLDNQGRNSGGPSKEAAVPQLLTMQEMLGQLMGMQKEMQKQMNVMV
SVPVSKEGRRLEGSLGRSLETVVKANSDALWARFQEENAKQEKLEGECMQQITNLITNFL
NKDLQSLLEKTVKKEISSLGPAVARSISQIIEKTISSVVTESFQKGVGEKALNQLEKSVN
SKLEATVARQIQVLFQTSGKQALQDALRTSLEASIIPAFEMSCKTMFEQIDSAFQKGLSK
HTSAAQQQLESTHTPLVIALRDAINSVSSISKTLSGELADGQRKLITIAAAGANPNSTNP
LAPQISNGLHEMVEAPVDPTKELSTLIAERKFEEAFAGALHRSDVSIVSWLCSQVDLQGI
LSMVPLPLSQGVLLSLLQQLSCDINTQTPRKLVWMREVAAAIDPADPMISGYVRPIFQQV
YQVLGQQRNLPHTSHSEASSIRLLMHVINSVLMSCK
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccagggaacccaaatcagcagcagcaacaagctggtcattttgatgtgcaa
aagcttttcaaaccttctactaatctcaactcttccccatcttttccagctccttcttct
tctcctcctcctccttcttcttatctaaccccttcttcttcttatcccccaccaactggt
ccatacacatttcaccctcactatctcccatatcaaatccaccaccaccaacaacagcca
tcccaagaacacccgcacgtccttctccaccaccaccaacaacttcctcagatgcacacc
ccacaaagaccaatctatacttctccttcaccatcctctcctcatgtcccttcatcccct
aatacgaataactccagtggtgcccgattgatggctctcttgagctcccaaaatcctcct
tccaatctagataggccccaatcctctgcccccttcccagtgtcactgtcacctccctcc
ccatcagctgcagtttcggaattatcaacgcccacaagcccttctgtgatgcaaaccact
cctccggcaacgcatgccaatatgacatccccacagactactccagcgaggttgctcagc
agaaaactcccgaaaggacggcatttaatgggaggtcacattgtttacgacattgatgct
cggttgccaggggaagtgcaaccccagcttgaagtcactcccatcaccaagtatgcctct
gatcctgggcttgtgctaggccgtcagattgctgttaatagatcttatatatgctatgga
ctgaaattgggtgcaatccgggtccttaatattaatactgctttaagatccttgcttcga
ggtcatacccagagagtaagtgatatggttttctttgctgaggatcttcacctcctagcc
agttctagcattgatgggagagttttcatatggaagattaatgagggcccggatgaggaa
gagaaacctcaaattacagggaaaattattacttccattcagatagcagtagacggtgaa
tcagttcacccacgagtgtgttggcatccccacaaacaagaaattttaatggttgctatt
gcaaatagtatcctcaaaattgacacaacaaaagttggaaaaggtgtaactttttcagcc
gaagaacctcttaaatgtcccattgataagttaattggtggggtctaccatattggtaaa
catgatgctgatgttactgagttgacaatgtgccaatggatgaagagccggttagcttca
gcatcaactgatggcacggtgaagatatgggaagaccgcaagtcactgccacttgctgta
ataaggccatatgatggtagacctgtcaattctgtgacattcttgactgcccctcaccgt
cctgatcacattgttcttatcacagcgggccctctaaatcgtgaagtgaaaatatgggtc
tctgcaagtgaggagggctggcttttgccaagtgacgatgagtcctggaactgtatccag
agtttgataataagaagttcttctgaagctaaggatgaggatgcattctttaatcaagtt
gtagcattgccacgtgcaggtctatttctgcttgcaaatgccaagaaaaatgctatatat
gctgtgcacatagaatatggatcgaatccagctgaaacccacatggattacattgctgag
ttcacggtcacaatgccaattttgagtcttactggaactagtgacattctacccgatgga
gaacatattgtacaagtctattgtgttcaaacacaagctattcagcagtatgcacttgac
ttatctcagtgtttgccaccatccctggacaatgtggaatttgagaaaacagacccttct
gtttcttgtgcttcggatgcttctgctaggttggctaccttgggatcacctactgacagt
ctcacttctgaaatacctgtcagtaatgcaactagtataccaccagttctttctagtagc
tctgaaagtgcctccatggtaagaagcccttccacaactttggctacttctgaggttaca
agcttgacagaagttgctagtacaggtaaggaaaccaagtccaataattttccatttgat
aatgatgctgaaaatatccacactgcaccacgtcctcttcctttgagtccaagattatct
cgaaagttttctggttctagaagttcaacaaataatatggagactagcccaactgttgtt
ctcagcagtgaccaagtacatgtgactgatctcgggttggactctcaaaaagataacaag
gctgatcttccttcctcggatgacagtttgagggagaatgataaacttgttgctcaaaat
gacatttctgtggtttctaatcctcctgcaacatttacccaccccacacatttagtaact
ccatcagagatattttctacagctactttgacttctgagaactctcaaatttctcagggt
atgaatgtagtagaagctaaggttcaagatgtggttgttaaccccgacacagataacact
gaactggaggttaaagttgtaggtgagacaggatccaatcaaaataagtttaactgtcag
atagaatctgatgctattcgtactgaaaaaagggagaaatcattctattcacaggcctcg
gatctgggcattcagatggccatagacagttgtgtgggaacttgcgacttggaggaagtt
catcgggctgatgatattagtgttactgatgaaccagggctacctcccaatattgctgca
gaagatattagaaaagatgtacctgcgagtgttagcgaatcagaaacccccttaatagtc
tcacagtctccagcaccagccgtgaaaggtaaaatacagaaagggaaaggttctcaggtt
ctgggtccatctccttcccagagtccttttaactctacagactcattagacaatcaaggt
cgcaattcaggtggcccatccaaggaagctgctgtgccccagttgttgactatgcaggag
atgctgggccagttaatgggcatgcaaaaggaaatgcagaaacaaatgaacgtgatggtg
tctgtcccagttagcaaagaaggtaggagattagaaggatcattgggtcggagcttggaa
acagttgtcaaggcaaacagtgatgcattatgggctcgttttcaagaagaaaatgccaaa
caggagaagttagaaggagaatgtatgcagcagatcacaaatttgattaccaatttctta
aacaaggacttgcaatctttattggagaaaactgttaagaaagaaatatcatctctcgga
ccagctgttgcccgttcaattagtcagattatagagaaaaccatatcatcagttgtcaca
gagtcatttcagaagggagtgggagagaaggcactgaatcaattagagaaatcagttaat
tcaaaacttgaagctacagttgctaggcaaatccaagtattgtttcaaacttctgggaag
caagctcttcaggatgcattgaggactagtttggaagcttctattatccctgcatttgag
atgtcatgcaaaactatgtttgagcaaattgattcagcatttcagaaagggctttctaag
catacaagtgctgcacaacagcagttggagtctactcatactcctcttgtcattgcttta
cgggacgcgatcaattcagtatcatcaatcagtaaaaccttgagtggagaactagctgat
ggccagcgtaaactaataaccattgcagctgctggtgccaaccctaactcaacaaatcca
ttggcaccacaaataagcaatggtttgcacgagatggttgaggcacctgtggatcctact
aaagaactgtcaacattgatagcagagagaaagtttgaagaagcatttgctggagccctt
cacagaagtgatgtctcaatagtttcttggttatgctctcaggttgatttgcagggcata
ttgtccatggtgccactgccactaagccaaggagtccttctgtctcttctccagcaattg
tcttgtgacatcaacacacaaacacctagaaagttggtgtggatgagggaggtggctgct
gccatagacccagcagacccaatgatttcagggtatgtgcggcccatttttcaacaggtg
tatcaagtactaggtcaacaaaggaatttaccacatacctcccattcagaagcaagcagt
atccgcctccttatgcatgttataaactccgtgttaatgagttgtaaatga
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