Quillaja saponaria (soapbark tree): O6P43_032674
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Entry
O6P43_032674 CDS
T09778
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_032674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_032674
03012 Translation factors [BR:
qsa03012
]
O6P43_032674
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O6P43_032674
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
O6P43_032674
Translation factors [BR:
qsa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
O6P43_032674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
nSTAND3
NACHT
Dicer_dimer
AAA_11
ATPase
PhoH
AAA_16
AAA_23
Motif
Other DBs
NCBI-ProteinID:
KAJ7943079
UniProt:
A0AAD7P5U1
LinkDB
All DBs
Position
14
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AA seq
1201 aa
AA seq
DB search
MSSSLRSSSPPLQFQSTPTHPKTLKSSKYLQFLAMKDMPPPSSYGGVYVPPHHRLRSVIS
SPNYTTAALINSKLRENQDTFLNPKATTLSNSQTQLEQLLLGNSHVVSACDDGISEEGSD
REFDLSVQKGACPYNDTDEWKQKLTMLLNDKDKQELISREKKDRRDFDQIAALANRLGLY
SHIYAKVIVFSKVPLPNYRFDLDDRRPQREVSIPFCVLRRVDAYLGEYLSQKSRMQERFP
DLSFSRSSSGGSISPDEGLFEQPELLASSKVVMEKVLWQRSLQMRDQQHDWQESPEGRRI
LEFCGNLPAYKEKEAILTAISGNQVVIISGETGCGKTTQIPQFILEAEVEAIRGAVCSII
CTQPRRISAISVSERVASERGEKLGESVGYKVRLEGIKGRDTHLLFCTTGILLRRLLADR
SLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLDAELFSSYFGRAPM
IKIPGFTYPVRTYFLENILEITGYRLTPYNQVDDYGQEKMWKMNKQAPRKRKSQIVSAVE
DALRAADFKGYSSQTRESLTCWNPDCIGFNLIEYLLGSICENERPGAVLVFMTGWDDISS
LKDKLLAHPVLGDTSRVLLLTCHGSMASSEQRLIFEEPDDGVRKIVLATNIAETSITIDD
VVFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECYHLYPRCVYDA
FAEYQLPEILRTPLQSLCLQITSLKLGSISEFLSRALQSPELLAVQNAIEYLKIIGALDE
NENLTVLGRYLTMFPMEPKLGKMLILGAMFNCLDPILSVVAGLSVRDPFLTPMDKKDLAE
AAKAQFSHDYSDHLALVRAYEGWKDAEIDLAGYEYCWKNFLSAQSMKAIDALRNEFLSLL
KDTGLVDTNTSSCNALSHDMHLIRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLYSN
SVNARDTKIPYPWLVFNEKIKVNSVFLRDSTAVSDAVLLLFGGRISKGDVDGHLKMLGGY
VEFFMKPAIAEIYQTLRRELDALIQKKLLYPRMGLHTHHELLSAVRLLVSEDQCTGRFVF
GRQVLKPSKPSTVASQPTLVSRTESGPGGDNSKSQLQTLLTRAGYVAPVYKTMQLKNGQF
RATVEFNGMQIMGQPCNNKKSAEKDAAAEALQWLMGETQTGHEFVNHMSLLLKKSKKDHN
Q
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttctcttcgttcttcctctcctcctttgcaattccagtccactcccactcac
cccaaaaccctaaaatcctcaaaatatcttcaatttctagcaatgaaggacatgccacct
ccgtcgtcgtacggaggcgtttacgttcctccgcaccaccgtttacgttccgtcatcagc
tcacctaattacactactgctgcgttgatcaactccaagcttcgtgaaaaccaagataca
tttttaaaccctaaagccactactctgtccaactcacaaacccagttggaacagctcctt
ttgggaaattcccatgtcgtttctgcatgcgatgatggaatttcagaggaagggtcggat
cgtgaatttgacttatcagtacaaaagggtgcttgcccctataatgatactgatgagtgg
aagcagaagttaaccatgcttttgaacgacaaggataagcaagagttgatctcaagagag
aagaaggatagacgtgattttgaccagatagcagctttggcaaatagactgggtttatat
agccatatatatgcgaaagttattgtctttagtaaggtcccgctgccaaactacagattt
gatctggatgataggcgcccacaaagggaggttagcatccctttctgtgtactgagaaga
gtcgacgcctatcttggagaatacctctctcaaaagtctaggatgcaggaaaggtttcca
gatctgtctttctcgagatcaagcagtggtggtagtatttctcctgatgaagggcttttt
gagcagcctgagctactggcatctagtaaggttgtcatggagaaagttctctggcagcga
agcttacaaatgcgtgatcagcagcatgattggcaggaatctccagaaggtagaagaatt
ctggaattctgtggaaatctccctgcttataaagagaaggaagcaatattgacagccata
tcaggcaatcaggttgttatcatctcaggtgaaactggctgtggcaagacgacacaaatt
ccacagttcattttggaggctgaggtagaagctattcgcggagctgtttgtagtattata
tgcacgcagccaagacgcatttctgcaatttctgtctctgaaagagttgcttcagagaga
ggggagaaattgggtgaatcagttggatataaagtacggttggagggtataaaagggagg
gatacccaccttcttttttgtaccacaggcatcttgctacgaagattactagctgataga
agcttgaaaggtgtaactcatgttattgtggatgagatccatgaacgtggaatgaatgaa
gattttctgcttattgtccttaaagatctccttcctcgccgaccagaactaaggctgatt
ctgatgagtgctaccctagatgcagagcttttctcatcctactttggcagagctccaatg
attaagattccgggctttacatatcctgttagaacttatttcttggagaatatccttgaa
attacgggctacagattgaccccttacaatcaagttgatgattatggtcaagagaagatg
tggaaaatgaacaaacaagctccaagaaagaggaaaagccaaattgtttctgcagttgag
gacgccctcagagctgctgatttcaagggatatagctcacagaccagggagtctttgaca
tgttggaatcccgactgtattggttttaatctgatagaatatcttttaggatccatatgt
gagaatgaaaggccaggtgctgttttagttttcatgactggatgggatgatataagctct
ttgaaggataagctgctagcacatccagtcttgggagatacaagccgagttctgttgcta
acttgccatggctcaatggctagttcagagcagaggttaatatttgaagagcctgatgat
ggagtgaggaagatagtgttggccaccaatattgctgagacaagtatcacaattgatgat
gttgtttttgttattgactgtgggaaggcaaaagagacttcatatgatgcactgaataat
acaccttgtttgcttccatcctggatctctaaggtttctgctcaacaaagaagaggaaga
gctggtcgtgttcaacctggagaatgttaccatctctatcctagatgtgtatatgatgct
tttgcagagtatcaattgcccgaaatattgaggacccctttgcaatctctttgcctgcaa
atcacaagtttaaaacttggaagtatatctgagttcttatccagggctttgcagtcacct
gagttactagcggttcaaaatgccattgagtacttgaaaatcattggggccttggatgag
aatgaaaatctgactgttttaggacgctacttgactatgtttccaatggagcccaaactt
gggaagatgcttatattaggtgctatgttcaattgcctggatcccatattaagtgttgtg
gctggcctcagtgtgagagatccttttttaacaccgatggacaaaaaagatcttgcagag
gcagcaaaagctcagttttcacatgattacagtgaccatcttgcacttgttagggcctat
gagggctggaaagatgctgaaatagacctcgctggatatgagtactgctggaagaatttt
ctttcagcacaatcaatgaaagctattgacgctcttcggaatgagttcctttccttgctc
aaagatactggcctagttgataccaacacaagcagctgcaatgcattgagccatgacatg
catctcatccgagcagttatttgttatggcctgtatcctggaatttgctctgttgttcat
aatgagaagtcgttttctctgaaaacaatggaagatggtcaggtgcttctgtactcgaat
tcagtcaatgctcgggacactaagattccatatccatggctagtttttaacgagaagata
aaagtgaactctgtgtttctccgtgactcaacagccgtgtctgatgctgtgctgcttctt
tttggtggaagaatctcaaaaggagatgttgatgggcacttaaaaatgttgggaggatac
gtggaattcttcatgaaacctgctattgctgagatttaccaaactttaagaagagaactt
gatgccttgatccagaagaaactactgtatccaaggatgggcttgcacacacatcatgag
cttctgtccgctgtgaggttgctagtttcagaggatcaatgtactggcagatttgtattt
ggccggcaggtccttaagccatcaaagccatctactgtagcctcacaaccaaccttggtt
tcaaggactgaaagtggacctgggggtgataattccaaaagtcagctgcaaactttgctt
accagggcaggttatgttgcccccgtctacaagactatgcaattgaagaatggccagttt
cgagcaactgttgagtttaatggaatgcaaataatgggccaaccttgtaataacaagaaa
agtgcagaaaaggatgcagcagctgaggctctgcaatggctgatgggagagacacaaaca
ggccacgagtttgtcaatcacatgtcattgttactgaagaaaagcaagaaagatcataac
caatga
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