Quillaja saponaria (soapbark tree): O6P43_033443
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Entry
O6P43_033443 CDS
T09778
Name
(GenBank) carbon catabolite repressor protein 4-like 4
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_033443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_033443
Enzymes [BR:
qsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
O6P43_033443
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_033443
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_033443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
KAJ7943969
UniProt:
A0AAD7KQQ5
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All DBs
Position
14
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AA seq
226 aa
AA seq
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MLFVAEFGLRKMSSTPTPKHPKFISVEGSYIYSRSKPDGFRFSLVSYTILAQSSLFPHSP
PPSLKWKARSNAILAVLKNFGADFLCLQEVDEYDSFYKENMENFGYSSIYMKRSGKKRDG
CGLLYKHDCAELVFEERIEYNDLVKSIPDGKLDDEYKDDLSDKQDLEPKNDSAFKKAPED
RGDPNDPHVRLKRDCVGILAAFTLKDPSHHVIIVANTHLYWNPEWT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgttgcagaattcggtttgagaaaaatgagctcaactccaacaccaaaacat
ccaaaatttatttctgtggaagggagttatatatattccagaagtaaaccagatgggttc
agattcagtctcgtctcttataccattttggctcagagttctctgttcccccactctcct
ccaccatctctgaagtggaaagcccgttcgaatgcaattttggctgtcctcaagaatttt
ggggctgattttctgtgcctacaggaagtagatgagtatgatagcttttacaaagaaaac
atggagaactttggatattctagcatttatatgaagagaagcggaaagaagcgtgatggg
tgtggattattatataagcatgattgtgcagagttggtcttcgaggagagaatagaatac
aatgatcttgtaaagtcaattccagatggaaaattagatgacgaatacaaagatgacctg
tctgataaacaagatcttgaacccaaaaatgattcagcatttaaaaaagctccggaggac
cgtggagatcccaatgatccccatgtgagactaaagcgtgattgtgttggaattttggca
gcattcacacttaaagatccttctcaccatgttattattgtcgcaaacacacatctttat
tggaatcccgaatggacctga
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