KEGG   Quillaja saponaria (soapbark tree): O6P43_033502
Entry
O6P43_033502      CDS       T09778                                 
Name
(GenBank) Exosome complex exonuclease
  KO
K12585  exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O6P43_033502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_033502
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     O6P43_033502
SSDB
Motif
Pfam: RNB PIN_4 OB_Dis3 Rrp44_CSD1 Rrp44_S1 OB_HELZ2 CSD2 Toxin_R_bind_C
Other DBs
NCBI-ProteinID: KAJ7944036
UniProt: A0AAD7P6J6
LinkDB
Position
14:complement(16042475..16055376)
AA seq 934 aa
MLHSKSFVKKSRAGRVTKVVREHYLRDDIYCGASICKVCDSSVARLSASASTILVLDTNV
VLNQIDLLENPAIDDVVVLSVVLDEVKNKNMAVYNRLRALCSNSLRKFFVFSNEHHKDTY
VKEMSGESKNDRNDRAIRVASQWYQSHLGDEVRVLLITNDRENRRKAVEEGIFAETVESY
VKSLGQPDLLDLLVQPASEDVDMAEVEDLRPSKRKVIYNEHKPMSEITSGLHRGIYHQGK
LRVNRYNPFEAYVGSESIGDEIVIYGRTNMNRAFDSDIVAVELLPQDQWHEEKSLSIAED
EEDEEDVHLVPSSADDAPRTTLPQQDSSRETNPVSYRPFGRVVGIIKRNWHSYCGSLEPM
PMPAGSGSVANALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDFLSRYPSGHYVRT
IGEIGDRDTESEVVLIENDIISRPFSAQVLACLPPLPWSVSPIDLSNPNRMDLCHLRVFS
VDPPGCKDIDDALHCSTLPNGNFEVGVHIADVTNFVFPGTPLDDEAAQRGTSTYLVERRI
DMLPKPLTEDICSLRADVERLAFSVIWEMTPEAEVISTRFTKSIIKSSAAMSYVEAQARM
DDSRLMDPLTTDLRNMNTLAKIMRLRRIDRGALTLASAEVKFQIDTETHDPLDIGMYQIR
EANQMVEEFMLAANVSVAKQILDHFPLCSLLRRHPTPTREMLEPLLRTAAAVGLHLDVSS
SKALADSLDHALGDDPYFNKLIRILATRCMTQAVYFCSGDLSRPEYHHYGLAAPLYTHFT
SPIRRYADVIVHRLLAASLNIDKLPSIFQDRPQLTSISDNLNYRHRNAQMAGRASVELHT
LIYFRKRPTDAEARIVKIRSNGFIVFVPKYGIEGPVYLTSRAEKGGGEWYVDEPQQKIKK
MDGSLSYSVLQAVKIHMEVVEPQPNRPKLQLTLI
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgttgcacagtaagtcttttgtcaagaaaagtagggccggaagagtaaccaaggttgtc
agggagcactatctaagagatgatatatattgtggagcctcaatttgcaaagtatgtgat
tcttcggttgctcggttgagtgcttctgcttcgactattcttgttcttgacaccaatgtc
gttctcaatcagattgatttgcttgagaatccggccattgatgacgttgttgtgttatcc
gtcgtgctggatgaggttaagaacaaaaatatggctgtttacaatcgactcagagctctc
tgcagcaattctttgaggaaattcttcgttttctctaatgagcaccataaggatacctat
gttaaggaaatgagtggagaaagtaaaaatgataggaatgacagagctattcgagttgct
agtcagtggtatcagagtcatcttggtgatgaagttcgggttttacttataaccaatgac
agagagaatagacggaaggctgttgaagaaggcatttttgcagagacagtcgagtcatat
gtgaaatcactgggtcaaccagatttgcttgacctgcttgtgcaacctgcatccgaagat
gtagatatggcggaagttgaagatttgcgaccttccaagaggaaagtcatttataacgag
cataagccaatgtccgaaatcacttctggtttgcaccgtggcatataccatcaaggaaag
cttcgcgtgaaccgttacaacccatttgaagcatatgttgggagtgagagtattggtgat
gaaatagttatttatgggcgtacaaacatgaatcgggcttttgacagtgatatagtggca
gtggaacttctacctcaagatcagtggcatgaagagaagagtctatctatagcagaggat
gaggaggacgaagaagatgttcatctcgttccaagcagtgctgatgatgcacctagaact
acacttccacagcaagattcttccagagaaacaaatcctgtctcatatcgtccgtttggt
cgtgttgttggaataataaagcgaaactggcattcttattgtggatctttggagccaatg
cctatgcctgcagggagtggcagtgttgccaatgctttattcgtctccaaagatcgcagg
atacctaaaattcgcattcagacccggcagcttgagaatcttctagacaagagaattatt
gtggcagttgattcttgggattttttatctcgatatccttcaggccattatgtaaggact
ataggagaaataggtgacagagatactgaaagtgaggtggttttgatagaaaatgatata
atatcaagaccattttctgctcaagttcttgcatgcttgccaccattaccttggtctgtc
tcacccatagacttgtcaaatccaaataggatggatttgtgtcatttacgtgtcttcagt
gtggaccctccaggatgcaaagatattgatgatgcactgcactgttctactcttccaaat
ggaaattttgaagttggagttcatatagccgatgtgacaaattttgtgtttcctggaact
cctcttgatgatgaggctgcacaacggggtacatccacctacctagttgagcggcggatt
gacatgcttccaaaacctcttacagaggatatatgttctcttcgagctgatgtagagaga
ctagctttctctgttatatgggagatgacgcctgaagcagaggttatctccaccagattt
acaaaaagtatcataaaatcttctgcagcaatgtcttatgtcgaagctcaggcaaggatg
gacgatagtcggttgatggatccactaactacagacttgaggaatatgaatactttagca
aagataatgaggttgaggcgtattgatagaggagctttaacccttgcttctgctgaggtc
aaatttcaaattgacacagagactcatgaccctcttgatattggtatgtatcagattcgg
gaagcaaaccaaatggtggaggagtttatgcttgctgctaatgtttctgttgccaaacaa
atccttgaccattttccgttgtgttcattactaaggcgccatccaactccaaccagagag
atgcttgaacctctgctgcgtactgctgctgctgttggtcttcatttggatgtctcgtct
tcaaaagctctagctgattcacttgaccatgccctgggtgatgatccttactttaataag
ttaatccggatactggccacaaggtgcatgacacaggcagtctatttctgtagtggagat
ctcagccgtccagaataccatcattatgggcttgcagctcctctatatactcacttcact
tctcctattagaagatatgcggatgttattgtacaccggctacttgctgcatctttaaac
atagacaagctaccatcaatattccaggacagacctcagctcactagtatttcagataat
ttaaactatcggcacaggaatgcgcagatggcaggccgggcttccgtagagctccatact
ctcatctacttcagaaagcggcccacggatgcagaggccagaatagtgaagataagatcc
aatggttttattgtatttgttccaaagtatggcattgaaggacctgtctatttgacatca
agagctgagaagggaggtggagaatggtatgtggatgagccgcagcaaaagatcaagaag
atggatggtagcttatcttacagtgttctgcaggcagtcaaaattcacatggaggttgtg
gagccccaacctaataggccaaaactccagctcactcttatctag

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