Quillaja saponaria (soapbark tree): O6P43_033502
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Entry
O6P43_033502 CDS
T09778
Name
(GenBank) Exosome complex exonuclease
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_033502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_033502
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
O6P43_033502
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RNB
PIN_4
OB_Dis3
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
CSD2
Toxin_R_bind_C
Motif
Other DBs
NCBI-ProteinID:
KAJ7944036
UniProt:
A0AAD7P6J6
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All DBs
Position
14:complement(16042475..16055376)
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AA seq
934 aa
AA seq
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MLHSKSFVKKSRAGRVTKVVREHYLRDDIYCGASICKVCDSSVARLSASASTILVLDTNV
VLNQIDLLENPAIDDVVVLSVVLDEVKNKNMAVYNRLRALCSNSLRKFFVFSNEHHKDTY
VKEMSGESKNDRNDRAIRVASQWYQSHLGDEVRVLLITNDRENRRKAVEEGIFAETVESY
VKSLGQPDLLDLLVQPASEDVDMAEVEDLRPSKRKVIYNEHKPMSEITSGLHRGIYHQGK
LRVNRYNPFEAYVGSESIGDEIVIYGRTNMNRAFDSDIVAVELLPQDQWHEEKSLSIAED
EEDEEDVHLVPSSADDAPRTTLPQQDSSRETNPVSYRPFGRVVGIIKRNWHSYCGSLEPM
PMPAGSGSVANALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDFLSRYPSGHYVRT
IGEIGDRDTESEVVLIENDIISRPFSAQVLACLPPLPWSVSPIDLSNPNRMDLCHLRVFS
VDPPGCKDIDDALHCSTLPNGNFEVGVHIADVTNFVFPGTPLDDEAAQRGTSTYLVERRI
DMLPKPLTEDICSLRADVERLAFSVIWEMTPEAEVISTRFTKSIIKSSAAMSYVEAQARM
DDSRLMDPLTTDLRNMNTLAKIMRLRRIDRGALTLASAEVKFQIDTETHDPLDIGMYQIR
EANQMVEEFMLAANVSVAKQILDHFPLCSLLRRHPTPTREMLEPLLRTAAAVGLHLDVSS
SKALADSLDHALGDDPYFNKLIRILATRCMTQAVYFCSGDLSRPEYHHYGLAAPLYTHFT
SPIRRYADVIVHRLLAASLNIDKLPSIFQDRPQLTSISDNLNYRHRNAQMAGRASVELHT
LIYFRKRPTDAEARIVKIRSNGFIVFVPKYGIEGPVYLTSRAEKGGGEWYVDEPQQKIKK
MDGSLSYSVLQAVKIHMEVVEPQPNRPKLQLTLI
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacagtaagtcttttgtcaagaaaagtagggccggaagagtaaccaaggttgtc
agggagcactatctaagagatgatatatattgtggagcctcaatttgcaaagtatgtgat
tcttcggttgctcggttgagtgcttctgcttcgactattcttgttcttgacaccaatgtc
gttctcaatcagattgatttgcttgagaatccggccattgatgacgttgttgtgttatcc
gtcgtgctggatgaggttaagaacaaaaatatggctgtttacaatcgactcagagctctc
tgcagcaattctttgaggaaattcttcgttttctctaatgagcaccataaggatacctat
gttaaggaaatgagtggagaaagtaaaaatgataggaatgacagagctattcgagttgct
agtcagtggtatcagagtcatcttggtgatgaagttcgggttttacttataaccaatgac
agagagaatagacggaaggctgttgaagaaggcatttttgcagagacagtcgagtcatat
gtgaaatcactgggtcaaccagatttgcttgacctgcttgtgcaacctgcatccgaagat
gtagatatggcggaagttgaagatttgcgaccttccaagaggaaagtcatttataacgag
cataagccaatgtccgaaatcacttctggtttgcaccgtggcatataccatcaaggaaag
cttcgcgtgaaccgttacaacccatttgaagcatatgttgggagtgagagtattggtgat
gaaatagttatttatgggcgtacaaacatgaatcgggcttttgacagtgatatagtggca
gtggaacttctacctcaagatcagtggcatgaagagaagagtctatctatagcagaggat
gaggaggacgaagaagatgttcatctcgttccaagcagtgctgatgatgcacctagaact
acacttccacagcaagattcttccagagaaacaaatcctgtctcatatcgtccgtttggt
cgtgttgttggaataataaagcgaaactggcattcttattgtggatctttggagccaatg
cctatgcctgcagggagtggcagtgttgccaatgctttattcgtctccaaagatcgcagg
atacctaaaattcgcattcagacccggcagcttgagaatcttctagacaagagaattatt
gtggcagttgattcttgggattttttatctcgatatccttcaggccattatgtaaggact
ataggagaaataggtgacagagatactgaaagtgaggtggttttgatagaaaatgatata
atatcaagaccattttctgctcaagttcttgcatgcttgccaccattaccttggtctgtc
tcacccatagacttgtcaaatccaaataggatggatttgtgtcatttacgtgtcttcagt
gtggaccctccaggatgcaaagatattgatgatgcactgcactgttctactcttccaaat
ggaaattttgaagttggagttcatatagccgatgtgacaaattttgtgtttcctggaact
cctcttgatgatgaggctgcacaacggggtacatccacctacctagttgagcggcggatt
gacatgcttccaaaacctcttacagaggatatatgttctcttcgagctgatgtagagaga
ctagctttctctgttatatgggagatgacgcctgaagcagaggttatctccaccagattt
acaaaaagtatcataaaatcttctgcagcaatgtcttatgtcgaagctcaggcaaggatg
gacgatagtcggttgatggatccactaactacagacttgaggaatatgaatactttagca
aagataatgaggttgaggcgtattgatagaggagctttaacccttgcttctgctgaggtc
aaatttcaaattgacacagagactcatgaccctcttgatattggtatgtatcagattcgg
gaagcaaaccaaatggtggaggagtttatgcttgctgctaatgtttctgttgccaaacaa
atccttgaccattttccgttgtgttcattactaaggcgccatccaactccaaccagagag
atgcttgaacctctgctgcgtactgctgctgctgttggtcttcatttggatgtctcgtct
tcaaaagctctagctgattcacttgaccatgccctgggtgatgatccttactttaataag
ttaatccggatactggccacaaggtgcatgacacaggcagtctatttctgtagtggagat
ctcagccgtccagaataccatcattatgggcttgcagctcctctatatactcacttcact
tctcctattagaagatatgcggatgttattgtacaccggctacttgctgcatctttaaac
atagacaagctaccatcaatattccaggacagacctcagctcactagtatttcagataat
ttaaactatcggcacaggaatgcgcagatggcaggccgggcttccgtagagctccatact
ctcatctacttcagaaagcggcccacggatgcagaggccagaatagtgaagataagatcc
aatggttttattgtatttgttccaaagtatggcattgaaggacctgtctatttgacatca
agagctgagaagggaggtggagaatggtatgtggatgagccgcagcaaaagatcaagaag
atggatggtagcttatcttacagtgttctgcaggcagtcaaaattcacatggaggttgtg
gagccccaacctaataggccaaaactccagctcactcttatctag
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