Quillaja saponaria (soapbark tree): O6P43_033727
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Entry
O6P43_033727 CDS
T09778
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_033727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_033727
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
O6P43_033727
Prokaryotic type
Archaeal type
TFB
O6P43_033727
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
zf-UBP
Motif
Other DBs
NCBI-ProteinID:
KAJ7944309
UniProt:
A0AAD7P714
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All DBs
Position
14
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AA seq
487 aa
AA seq
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MKCPYCSAAQGRCATTNSGRSITECTSCGRVVEERQSNPHHLFHLRAQDNPLCLVTSDLP
TLQAQHQTHEEDPFEPTGFITAFSTWSLERSPLFLQSCVSFSGHLAELERTLESSSSSTS
SSSSSSTVAVDNLRAYMQIIDVASILGLDYDISDHAFQLFRDCCSATCLRNRSIEALATA
ALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPLNSNSISVHMPRFCN
LLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGL
TEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSAPKVDAVEVTSSLDG
EKQREIRLGKPNEVSDIGHQPRGKEDIEGKSNYGGSTATLNQQATLWQSQLPLGSAGLRT
AGEKNQNVTCGMDIDNVQHNHHQPEQNTNLAASSLKPTQLSSPPASTATSVMTPFSVPPS
SGTTPNV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccttactgctcggcggctcagggtcgttgcgccaccaccaactccggccgt
tctatcacggagtgcacatcttgcggccgtgtcgttgaagaacgccaatcgaatccccac
catctctttcacctccgtgcccaagacaaccctctctgcctggttacctccgacctcccg
accctccaagcgcaacatcaaactcacgaggaagacccattcgagcctacaggattcatt
acggcattctccacctggtcccttgagcgcagtccgctcttccttcaatcctgcgtatcc
ttctctggccaccttgctgagctcgagcgcacacttgaatcatcatcttcgtcgacttca
tcatcgtcgtcttcatcgactgtcgcagttgataatttgagggcttacatgcagattata
gatgtggcgtcaatactggggttggactatgacatttcggaccatgcgtttcaattattc
agggattgctgctcggctacttgtttgagaaacagaagcattgaagcacttgctactgct
gctcttgttcaggccattagagaggctcaagagccaagaacccttcaggaaatctcaatt
gcagccaatgtaccgcagaaggaaatcgggaagtacatcaagatacttggagaagctctg
caacttagtcaaccactaaatagcaactcaatatcggtccatatgcctagattttgcaat
ctccttcagctcaataaatccgctcaggaactggctactcacattggggaggttgttatc
aacaaatgcttctgcactcgcagaaaccccattagcatctcagctgcagctatatatttg
gcctgccaactggaagacaaacgcaaaacccaggcagaaatttgtaaggtaacaggtctg
actgaggtcactctccgtaaagtatacaaggaactgttggagaactgggatgatttgcta
ccctctaattacacgccagctgttcctccagagagggcgttccctacaactgtaattgct
tcaggccgttcttcagcgcctaaggttgatgctgttgaggttacttcttctttagatgga
gaaaagcagcgagaaattagacttggcaaacccaacgaggtctcagacattggacatcag
cctagggggaaagaggatattgaaggtaaaagcaattatggaggatccactgccacatta
aaccagcaagccactttatggcagtctcagcttccccttggatcagctggccttagaaca
gcgggagaaaagaatcagaacgtcacatgtggcatggacattgataatgtgcaacataac
caccaccagcctgagcagaatacaaatcttgctgctagttctctgaaaccaacccaactt
tctagccctcctgcttcaactgcaacttctgtgatgacgcctttctcagtcccaccttca
tcagggactactccaaatgtttga
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