Quillaja saponaria (soapbark tree): O6P43_034206
Help
Entry
O6P43_034206 CDS
T09778
Name
(GenBank) Replication factor C subunit like
KO
K10755
replication factor C subunit 2/4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03030
DNA replication
qsa03410
Base excision repair
qsa03420
Nucleotide excision repair
qsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O6P43_034206
03410 Base excision repair
O6P43_034206
03420 Nucleotide excision repair
O6P43_034206
03430 Mismatch repair
O6P43_034206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsa03032
]
O6P43_034206
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_034206
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_034206
DNA replication proteins [BR:
qsa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
O6P43_034206
DNA Replication Termination Factors
ELG1-RFC complex
O6P43_034206
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
O6P43_034206
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
O6P43_034206
Check point factors
HRAD17(Rad24)-RFC complex
O6P43_034206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
nSTAND_NTPase5
AAA_14
AAA_22
AAA_lid_RFC1
Mg_chelatase
AAA_16
Viral_helicase1
Rad17
RuvB_N
RCF1-5-like_lid
AAA_11
AAA_19
AAA_5
AAA_assoc_2
nSTAND3
AAA_30
DNAX_ATPase_lid
NTPase_1
AAA_25
MeaB
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
AAA_18
bpMoxR
AAA_7
AAA_3
ABC_tran
MipZ
AAA_24
AAA_29
Motif
Other DBs
NCBI-ProteinID:
KAJ7944876
UniProt:
A0AAD7P7D4
LinkDB
All DBs
Position
14:complement(19820834..19824523)
Genome browser
AA seq
336 aa
AA seq
DB search
MASSSSWNNSSSSSNYDIPWVEKYRPAKVADIVGNEDAVSRLQVIARDGNMPNLILSGPP
GTGKTTSILAVAHELLGSNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIV
ILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEI
LGRLMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQP
HPLHVKNMVRNVIEGKFDEACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMK
ETGFAHMRICDGVGSYLQLCGLLAKLSLARETAKAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcttcatcgtggaataatagcagcagcagcagcaactacgatatcccttgg
gtggagaagtatcgacccgccaaggtcgcggacatcgtcggaaacgaggacgcagtttcc
aggctgcaagtcatcgctcgagatggaaacatgcccaatctcatattgtctggtcctcct
ggcactggaaaaaccactagtatacttgctgttgcacatgagcttctgggatcaaattgc
aaagaagctgttctggagttaaatgcatctgatgatagaggtatagatgtcgtgaggaac
aaaattaagatgtttgcacagaagaaagttacactgcctcctgggcggcacaaaatagta
atattggatgaagctgacagcatgacatcaggagcacagcaagctctgaggaggacaatg
gaaatatattcaaactcaactcgttttgctcttgcatgcaatacatcttctaaaataatt
gaacctattcagagtaggtgtgctattgttcgattttcaagattatctgatcaagagata
cttggtcgccttatggtggtggttgaagctgaaaaggttccctatgttccagaaggtctt
gaagccatcattttcactgctgatggtgatatgaggcaggcattgaataacttgcaagct
acatttagtggattccggtttgttaaccaagaaaatgttttcaaggtttgtgaccagcct
catccattgcacgtgaagaatatggtgcgtaatgtcattgaagggaaatttgatgaggct
tgtttgggtcttaagcagctttatgatttaggctactcccccactgatataatcacgacc
ctttttcgcatcataaagaattatgacatggctgaatacctgaaattggaatttatgaag
gaaactgggtttgcccatatgagaatctgtgatggagttggttcatatctacagttgtgt
ggtcttttggcaaagctttctctggctcgtgagacagctaaggctgcttaa
DBGET
integrated database retrieval system
