Quillaja saponaria (soapbark tree): O6P43_034398
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Entry
O6P43_034398 CDS
T09778
Name
(GenBank) Eukaryotic initiation factor 4A (ATP-dependent RNA helicase eIF4A)
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03013
Nucleocytoplasmic transport
qsa03015
mRNA surveillance pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_034398
09122 Translation
03013 Nucleocytoplasmic transport
O6P43_034398
03015 mRNA surveillance pathway
O6P43_034398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_034398
03041 Spliceosome [BR:
qsa03041
]
O6P43_034398
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_034398
03012 Translation factors [BR:
qsa03012
]
O6P43_034398
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_034398
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
O6P43_034398
mRNA cycle factors
Stress granule specific factors
O6P43_034398
Spliceosome [BR:
qsa03041
]
Complex C
Other components
EJC/TREX
O6P43_034398
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
90S particles
Helicases
O6P43_034398
Translation factors [BR:
qsa03012
]
Eukaryotic type
Initiation factors
eIF-4
O6P43_034398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
Helicase_RecD
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
KAJ7942563
UniProt:
A0AAD7KMI8
LinkDB
All DBs
AA seq
409 aa
AA seq
DB search
MAATATTSVVPANRRRVTSQPDDLDFETTEGVEPIMSFDQMGIKDDVLRGIYHHGFNKPS
AIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTACQMVDTSIREVQVLIMSPTRELASQT
EKVILAIGDYINIQAHACVGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIK
LLVLDESDEMLSRGFKDQIYDVYRYLPPEIQVVLISATLPHEILEITSKFMADPVRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNF
TVSAMHGDMPQKERDAIMSEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI
HRIGRSGRFGRKGVAINFVKTDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaccgccacaactagcgtggtgccggctaaccgtcggcgtgtgacgagccag
ccggatgatttggatttcgagacgacggagggagttgagcctattatgagcttcgatcag
atgggaatcaaggacgatgtactccgaggcatttaccaccatgggtttaataaaccctcg
gctatccagcagcgagctgtcagacccattattgaaggtcgagatgttatcgcccaggcc
caatctggtacaggaaagacctccatgattgccctcactgcttgtcaaatggtggacact
tctatcagagaggtccaagtgttgatcatgtcaccaactagggagctggcatctcagaca
gaaaaggttatattggcaattggagattacataaatatacaagcacatgcatgtgttgga
ggcaaaagtgtgggggaggatataagaaagctagaatatggagttcatgtggtgtcggga
actcctggacgagtttgtgacatgataaagaggagaacactgcgcactagagccatcaag
ttattggttcttgatgaatctgatgagatgttgagcagagggttcaaggatcaaatttat
gatgtttacagatatcttcccccggaaattcaggttgtcttgatttctgccacactccct
catgaaatattggagattacaagtaagttcatggcagatcctgtacggatccttgtaaaa
cgtgatgagttgactttggagggcatcaagcaattttttgttgcggttgaaagagaagag
tggaagtttgatactctctgtgatttatacgacacccttactattacccaagcagttatt
ttctgcaacacaaagcgaaaggttgactggctaactgagaaaatgcgtagcaataacttc
actgtttcagcaatgcatggtgatatgcctcaaaaggagagagatgcaattatgtcagag
tttaggtctggtacaacccgtgttctgattacaacagatgtttgggctaggggccttgat
gttcaacaggtttctctagttatcaattatgaccttcccaacaatcgagaactttacatt
catcgaattggtcgatctggtcgttttggacgcaagggtgttgcaataaactttgtcaag
actgatgatatcaaaatcttaagagacatagagcaatattacagtacacagattgatgaa
atgccaatgaatgttgctgatctgatataa
DBGET
integrated database retrieval system
