Quillaja saponaria (soapbark tree): O6P43_035196
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Entry
O6P43_035196 CDS
T09778
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O6P43_035196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_035196
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_035196
Enzymes [BR:
qsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O6P43_035196
Transcription machinery [BR:
qsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O6P43_035196
DNA repair and recombination proteins [BR:
qsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O6P43_035196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S11
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
KAJ7941755
UniProt:
A0AAD7P4J5
LinkDB
All DBs
AA seq
440 aa
AA seq
DB search
MAKPIPRTSSRRNGRISSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG
FKGTRRGTPFAAQTAAGNAIRTVADQGMQRAEVMIKGPGLGRDAALRAIRRSEKVRVSTR
TLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIP
HEYSTIVGIQESVHEILMNLKEIVLRSNLYRTRDASICVKGPGYVTAQDIILPPSVEIVD
NTQHIANLTEPIHFCIGLQIERNRGYRIKTPNNFQDGSYPIDAVFMPVRNANHSIHSYVN
GNEKQEILFLEIWTNGSLTPQEALYEASRNLIDLFIPFLHAEEENLHLENNQHKVTLPLF
TFHDRLAKLRKNKKEIVLKYIFIDQSELPPRIYNCLKRYNIHTLLDLLNKSQEDLMKIEH
FCIEDVKHILDILEIEKHFA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctataccaagaactagttcacgtaggaatgggcgtattagttcacgtaag
aatgcgcgtagaataccaaagggagttattcatgttcaagctagtttcaacaataccatt
gtgactgttacggatgtacgaggtcgggtgatttcttggtcctccgccggtacttgtggc
ttcaaaggtacaagaagggggacaccatttgccgctcaaaccgcagcaggaaatgctatt
cggacagtagcggatcaaggtatgcaacgggcagaagtcatgataaaaggtcccggtctc
ggaagagatgcggcattaagagctattcgtagaagtgagaaagtaagagtatctactcgg
acactacagtggaagtgcgttgaatcaagagcagacagtaaacgtctttattatggacgc
tttattctgtctccacttatgaaaggtcaagctgatacaataggcattgcgatgcgaaga
gctttgctcggagaaatagagggaacatgtatcacacgtgcaaaatctgagaaaataccc
catgaatattcgaccatagtaggtattcaagaatcggtacatgaaattttaatgaattta
aaagaaattgtattgagaagtaatctgtatagaacgcgggacgcgtccatttgcgtcaag
ggtcctggatatgtaactgctcaagacattattttaccaccttctgtggaaatcgttgat
aatacacaacatatagctaacctaacagaacccattcatttttgtattggattacaaatt
gagaggaatcgtggatatcgtataaaaacgccaaataactttcaagacggaagttatcct
atagatgctgtattcatgcctgtccgaaatgcaaatcatagtattcattcttatgtgaat
ggaaatgaaaaacaagagatactttttcttgaaatatggacaaatggaagtttaactccc
caagaagcactttatgaagcctcccgtaatttgattgatttatttattccttttttacat
gcagaagaagaaaacttacatttagaaaacaatcaacacaaagttactttaccccttttt
acttttcatgatagattagctaaactaaggaaaaataaaaaagaaatagtattgaaatat
atttttattgaccaatcagaattgcctcccaggatctataattgtctcaaaaggtacaat
atacatacattgttggaccttttgaataagagtcaagaagaccttatgaaaattgaacat
ttttgcatagaagatgtaaaacatatattggacattctagaaatagaaaagcattttgca
taa
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