Quillaja saponaria (soapbark tree): O6P43_035315
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Entry
O6P43_035315 CDS
T09778
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O6P43_035315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_035315
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_035315
Enzymes [BR:
qsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O6P43_035315
Transcription machinery [BR:
qsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O6P43_035315
DNA repair and recombination proteins [BR:
qsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O6P43_035315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
KAJ7941636
UniProt:
A0AAD7P4G7
LinkDB
All DBs
AA seq
795 aa
AA seq
DB search
MLYLSPSRDEYYMVATGNSLALNRGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFS
IGASLIPFIEHNDANRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVPAIAEHEG
KIVYTDTDKIIFSGNGDTLSIPLVMYERSNKNTCMHQKPRVPRGKCIKKGQILADGAATV
GGELALGKNVLVAYMPWEGYNSEDAVLLSERLVYGDIYTSFHIRKYEIQTHVTSHGPERI
TKEIPHLEAHLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGI
QVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRIYISQKREIKVGDKVAGRHG
NKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQILECSLGLAGGMLDRHYRIA
PFDERYEQEASRKLVFSELYEASKQTANPWVFEPDIPLFFTTQGFDTFRNREISTGAGAI
REQLDDLDLRIIIDYSLVEWKELGEEGSTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNI
EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYS
GRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHFASNIGVAKSKIREKEPIVWE
ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVSIGDPNFCTNSRYAYWA
LVLTSWESVDGLCAN
NT seq
2387 nt
NT seq
+upstream
nt +downstream
nt
atgctttatttatcgccaagtagagatgaatactatatggtagcgacgggaaattctttg
gcgctgaatcggggtattcaggaggaacaggttgttccagctcgataccgtcaagaattt
ctgactattgcatgggaacaggttcatcttcgaagtatttttcccttccaatatttttct
attggagcttccctcattccttttatcgagcataatgatgcaaatcgagctttaatgagt
tctaatatgcaacgtcaagcagttccgctttctcagtccgaaaagtgcattgttggaacc
gggttggaacgccaagtggctctagattcaggggttcccgctatagccgaacacgaggga
aagatcgtttataccgatactgacaagatcattttttcgggcaatggggatactctaagc
atcccattagttatgtatgaacgttccaacaaaaatacttgtatgcatcaaaaaccccgg
gttccgcggggtaaatgcattaaaaaaggacaaattttagcggacggtgctgctacagtt
ggtggcgaactcgctttgggaaaaaacgtattagtagcttatatgccatgggaaggttac
aattctgaagatgcggtactccttagtgagcgtctggtatatggagatatttatacttct
tttcacatacggaaatatgaaattcagactcatgtgacaagccatggccccgaaagaatc
actaaagaaataccgcatctagaggcccatttactccgaaatttagacaaaaatggaatt
gtgatgctgggatcttgggtagagacgggcgatattttagtgggtaaattaacgcctcaa
atggcgaaagaatcatcgtatgccccggaagatagattattaagagctatacttggcatt
caggtatccacctcaaaggaaacttgtctaaaactacctataggtggtaggggtcgagtt
attgatgtgagatggatccagaaaaaggggggttctagttataatccagaaacgattcgt
atatatatttcacagaaacgtgaaatcaaagtaggtgataaagtagccggaagacatgga
aataaaggtatcgtttccaaaattttgcctagacaagatatgccttatttgcaagatgga
agacccgttgatatggtcttcaatccattaggggtaccctcacgaatgaatgtaggacag
atattggaatgttcactcgggttagcggggggtatgctagatagacattatcgaatagca
ccttttgatgagagatatgaacaagaggcttcgagaaaactagtgttttctgaattatat
gaagccagtaagcaaacagcgaatccgtgggtatttgaacccgacatcccactttttttt
actacccaaggcttcgatacatttcgaaatcgagaaatttctactggagcaggcgctatc
cgagaacaattagacgatctggatttgagaattattatagattattcgttggtagaatgg
aaagaattaggggaagaggggtccacgggtaatgaatgggaagatcgaaaagttggaaga
agaaaggattttttggttagacgcatggaattagctaagcattttattcgaacaaatata
gaaccagaatggatggttttatgtctattaccagttcttcctcccgaattgagacccatc
attcaaatagatgggggtaaactaatgagctcggatattaatgaactctatagaagagtt
atctatcggaacaatactcttatcgatctattaacaacaagtagatctacgccgggggaa
ttagtaatgtgtcaggagaaattggtacaagaagccgtggatacacttcttgataatgga
atccgcggacaaccaatgagggacggtcataataaggtttacaagtcgttttcggatgta
attgagggcaaagagggaagatttcgcgagactctgcttggcaaacgggttgattattcg
gggcgttccgtcattgtcgtaggtccctccctttcattacatcgatgtggattgcctcgt
gaaatagcaatagaacttttccagacatttgtaattcggggtctaattagacaacatttt
gcttcgaacataggagttgctaagagtaaaattcgggaaaaagaaccgattgtatgggaa
atacttcaagaagttatgcaggggcatcccgtattgctaaatagagcgcctactctgcat
agattaggcatacaggcattccagcccattttagtggaaggacgcgctatttgtttacat
ccattagtttctattggggatcccaatttctgtaccaactcaagatatgcttattgggct
ttagtattaacgagctgggaatccgtcgatggtctttgtgcaaatag
DBGET
integrated database retrieval system
