Qipengyuania soli: IRL76_05105
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Entry
IRL76_05105 CDS
T09808
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
qso
Qipengyuania soli
Pathway
qso02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
qso00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IRL76_05105 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qso03021
]
IRL76_05105 (rpoD)
Transcription machinery [BR:
qso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IRL76_05105 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Disulph_isomer
DUF4168
FUSC
Motif
Other DBs
NCBI-ProteinID:
QPC99915
UniProt:
A0A7S8IVR1
LinkDB
All DBs
Position
complement(1012725..1014776)
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AA seq
683 aa
AA seq
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MATKSKSGDNDDAPLIDLNEASIKKLIAKAKKRGYVTYDELNDALPQGEMSSDQIEDIQS
ALSDMGVQIVESDEDAEAAEDSDNDVEEIAADDSDDDDDDSKPAKKTAAASKKLATGERT
DDPVRMYLREMGAVELLSREGEIAIAKRIEAGRDMMIMGLCQSPITFHAIIQWSEALNNE
EMQLREILDLDAMLSKEPPADKLADDAEDDDDDGEISEATAGPTIRDDDEVEEEEDVDED
EDEDGEGSSKRRAADDDDEEDNTMSLAQMEAALKPDAIERFARITDLFGKFEKLQAERVE
IMGRGEAFPPAKEKKYEALSEQLTAEVESVQFHATKIEFLVDNLYAFNRRLTALGGQMLR
LAERHKVKRADFLDAYIGNELDDTWLTDRAKKDKKWAAFAEREADAVERIRAEISDIASQ
TGMALDEFRRIVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNI
GLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQF
LHEEGREPTPEEMAARLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIQDPNAII
PVDAAIQSNLKETVTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQI
EAKALRKLKHPSRSRKMRSFLDQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaagtcgaagtctggcgacaatgacgacgcaccgctgatcgatctcaacgaa
gcatcgatcaagaagctgatcgccaaggcgaaaaagcgcggatacgtcacctatgacgaa
ctcaacgacgcccttccgcagggcgagatgagttccgaccagatcgaggatatccagtca
gcgctgtccgacatgggcgtgcagatcgtcgagagtgacgaggacgccgaggcggccgag
gattcggacaacgacgtcgaggaaatcgccgccgacgattcggacgacgacgacgacgat
tcgaagcctgcaaaaaagactgcagcggcctccaagaagctggcgaccggcgaacgcacc
gatgacccggtgcgcatgtacctgcgcgaaatgggtgcggtcgaactgctcagccgcgaa
ggcgaaatcgccattgccaagcgcatcgaggccgggcgcgacatgatgatcatgggcctg
tgccagagcccgatcaccttccacgccatcatccagtggtccgaagccctcaacaacgag
gaaatgcagctgcgcgagattctcgatctcgacgcgatgctttccaaggaaccgcctgcc
gacaagctcgccgacgacgccgaggacgatgacgacgacggcgagatctccgaagcgact
gcgggcccgaccatccgcgacgacgacgaggtcgaggaagaggaagacgtcgacgaagac
gaggacgaggacggcgaaggctcgtccaagcgtcgcgccgcggacgatgacgacgaggaa
gacaacaccatgtccctcgcccagatggaagccgcgctcaagccggatgccatcgaacgt
tttgcccgcatcacggacctcttcggcaagttcgagaagctccaggccgagcgagtcgag
atcatgggccgcggcgaggctttcccgccggccaaggaaaagaagtacgaagcgctgagc
gaacagctcaccgctgaagtcgaaagcgtccaattccacgcgaccaagatcgagttcctg
gtcgacaacctctacgccttcaaccgtcgcctcacggcgctgggtggccagatgctgcgc
cttgccgagcgccacaaggtcaagcgcgccgacttcctcgatgcctatatcggcaacgag
ctcgacgatacctggctcaccgaccgcgccaagaaggacaagaagtgggcagctttcgcc
gagcgtgaagccgatgcggtagaacgcatccgtgcggaaatctccgacatcgccagccag
accggcatggcgctcgacgagttccgtcgcattgtgaacatggtccagaagggtgaacgc
gaagcgcgtatcgccaagaaggaaatggtcgaggcgaacctgcgcctggtgatctcgatc
gcgaagaagtacaccaaccgcggcctgcagttcctcgacctcatccaggaaggcaacatc
ggcctgatgaaggcggtcgacaagttcgaataccgccgcggctataagttcagcacctat
gcgacatggtggatcaggcaggcgattacccgctcgatcgccgaccaggcacgcaccatc
cgtatcccggtccacatgatcgagacgatcaacaagctggtccgcacgagccgccagttc
ctccacgaggaaggtcgcgagccgacgccggaagagatggccgcacgcctctcgatgccg
ctcgaaaaggttcgcaaggtgatgaagatcgccaaggaaccgatttcgctcgaaacgccg
atcggcgacgaggaagacagccatctgggcgacttcattcaggatccaaatgccatcatc
ccggtcgatgcggcgatccagtcgaacctcaaggaaacggtcacccgtgtccttgcctcg
ctcacgccgcgcgaagagcgcgtgctgcgcatgcgtttcggtatcggcatgaacaccgat
cacacgctcgaggaagtcggtcagcagttctcggtgacccgcgaacgtatccgtcagatc
gaggcgaaggcgctgcgcaagctcaagcacccgagccgcagccgcaagatgaggtccttt
ctggaccagtaa
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integrated database retrieval system
