Qipengyuania soli: IRL76_07995
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Entry
IRL76_07995 CDS
T09808
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
qso
Qipengyuania soli
Pathway
qso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IRL76_07995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qso03019
]
IRL76_07995
Enzymes [BR:
qso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IRL76_07995
Messenger RNA biogenesis [BR:
qso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IRL76_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QPC97845
UniProt:
A0A7S8IU22
LinkDB
All DBs
Position
complement(1601392..1602789)
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AA seq
465 aa
AA seq
DB search
MTQFSDLGLSQPVLQALDLKGYDTPTPIQEQAIPPVLAGRDLMGIAQTGTGKTAAFMLPS
IDRLREAEKQTPFKSCRMLVLAPTRELAGQIAQSAKDYGALAGLKVQSIVGGTSVNKDRN
KLHRGTDILVATPGRLLDLIDQKAFALNGVEILVLDEADQMLDLGFIHALKRISQLVPKE
RQTLFFSATMPKSIKDLAAQYCQSPVHVSVTPESTTAERIEQYLFMVQQDEKQTLIEMIL
KGRHRVPGEFERVLVFTRTKHGADRVVKKLGQVGVRANAIHGNKSQPQRERALGEFRSGT
TPVLVATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGRDGIAIAFCAEDERD
YLKDIRKKTDAEFERLPLPDNFRAVVEGVGPTKREQKPKLARPNVRPTGDAAARKPKPKN
KHPNRAGAPKRDGASGGGAPGGRPQGKRPGGGGNRRRRSGARRQA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacacagttttcagacctcgggctttcgcagcccgtcctccaggccctcgatctcaag
ggctacgacacgccgactccgatccaggagcaggccattccccccgtcctcgcgggccgc
gacctcatgggcatcgcccagaccggcaccggcaagacggccgccttcatgctgccctcc
atcgaccgtctgcgcgaggcggagaagcagaccccgttcaagtcctgccgcatgctggtg
cttgcgccgacccgcgaactggcggggcagattgcccagtcggccaaggactacggcgcg
cttgccggactcaaggtgcagtcgatcgtcggcggcacctcggtcaacaaggaccgcaac
aagctccaccgcgggaccgacatcctcgtggccacgccgggccgcctgctcgacctcatc
gaccagaaggccttcgcgctaaacggcgtcgaaatcctcgtcctcgacgaggccgaccag
atgcttgacctcggctttattcatgccctgaagcggatcagccagctggtgccgaaggag
cgccagacgctgttcttcagcgccaccatgcccaagtcgatcaaggacctcgccgcgcaa
tactgccagtcgccggtccacgtctcggtcactcccgaaagcaccacggcggagcgcatc
gagcagtatctcttcatggtccagcaggacgagaagcagaccctgatcgagatgatcctc
aagggccgccaccgcgtgccgggcgagttcgagcgcgtgctcgtcttcacccgcaccaag
cacggtgccgaccgcgtggtgaagaagctcggccaggtcggcgtgcgcgcgaatgccatc
cacggcaacaagagccagccgcagcgcgaacgggcgctgggcgaatttcgcagcggcacc
acgccggtgctggtggcgaccgacgtcgccgcgcgcgggatcgacatcccgggcgtcagc
cacgtcatcaactacgagctgcccaacgtgcctgaacagtacgtccaccgcatcggccgc
accgcgcgcgccgggcgtgacggcattgccatcgccttctgtgccgaggacgagcgcgac
tacctcaaggacattcgcaagaagaccgacgccgagttcgagcgcctgccgctgccggac
aatttccgcgccgtggtcgaaggcgtcgggccgaccaagcgcgagcagaagcccaagctt
gcccgcccgaacgtgcgccccaccggcgatgccgcggcaaggaagccgaagccgaagaac
aagcaccccaaccgtgccggcgcacccaagcgcgatggcgcaagcgggggcggggcaccc
ggcggtcgtccgcagggaaagcgacccggcgggggcggcaatcgtcgccggcgttcgggg
gcccgtcgccaagcctga
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