KEGG   Qipengyuania spongiae: L1F33_00685
Entry
L1F33_00685       CDS       T08950                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
qsp  Qipengyuania spongiae
Pathway
qsp02020  Two-component system
qsp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:qsp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L1F33_00685
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    L1F33_00685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsp03021]
    L1F33_00685
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:qsp02035]
    L1F33_00685
Transcription machinery [BR:qsp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L1F33_00685
Bacterial motility proteins [BR:qsp02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    L1F33_00685
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Rv2175c_wHTH HTH_23 PhyR_sigma-like
Other DBs
NCBI-ProteinID: UVI39513
UniProt: A0ABY5T2G2
LinkDB
Position
complement(126229..126954)
AA seq 241 aa
MKYDHSNFNAQRAYATEINQRIERFLPMVRKLAWYYESSCSASLDIDDLLQAGMIALTEC
AQRHERPSEDGFAAYAKIRVRGAMIDLLRSQSHHVRGSAALRRKMDAAADELRRELGRDP
SAEETAFALGVSVDEFHKARGQVATKLVDLEECYSDSNPSFVSDEPNAEMRLLEAADKEA
LTDAIAALPERLQLIIQLHFLEELNLTEIAAILDVSVPRVHQLKSSALEKLRLGLVSAEA
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaatacgaccattcgaacttcaatgcgcagcgcgcttacgcgaccgagatcaaccag
cggatcgagcgtttcctgcccatggtccgcaagctggcctggtattacgagagcagctgc
agcgcctcgctcgacatcgacgacctgctccaggcggggatgatcgcgctcaccgaatgt
gcccagcggcacgagcggccgagcgaggacggctttgccgcctatgccaagatccgggtg
cgcggggcgatgatcgatctgttgcgctcgcaatcgcaccatgtccgtggctcggcagca
ttgcgccgcaagatggacgcggccgccgacgaattgcgccgcgagctgggccgcgatccc
agcgccgaggaaaccgccttcgcgctgggcgtgtcggtcgacgaattccacaaggctcgg
gggcaggtggcgaccaagctggtcgatctggaagaatgctattcggatagcaatccttcc
ttcgtcagcgacgaacccaatgcagagatgcgcctgctggaagcggccgacaaggaagcg
ctgaccgatgcgatcgccgcgcttcccgagcgcttgcagctgattatccagctccatttc
ctcgaggagctgaacctcaccgagatcgccgcgatcctcgatgtgagcgtcccgcgcgtc
catcagctgaagtcgagcgcgctggagaagctgcgcctcggcctcgtctccgccgaggct
gattga

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