Entry |
|
Name |
(GenBank) excinuclease ABC subunit UvrA
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
qsp Qipengyuania spongiae
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:qsp00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L1F33_01380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:qsp03400]
L1F33_01380
DNA repair and recombination proteins [BR:qsp03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1F33_01380
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1F33_01380
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(262664..265324)
|
AA seq |
886 aa
MKSKDIHATTPATDHGHTGPPSCVQVRGARQNNLKNIDVDVPRDAFVVFTGISGSGKSSL
AFGTLYAEAQRRYLESVAPYARRLIDQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGS
VTTLSSLVRMLYSRVGEYPRHQSMLYAEDFSPNTVAGACPTCHGIGRVYDATEETMVPDD
SLTIRDRAIAAWPTAWHGQNLRDILVSLGYDVDTPWRDLPKKDRDWILFTEEAPTVPVYA
GLTPEQTRTALKGGMEPSYQGTFTGARRYVLETFANTKSALMKKRVSQYIIGRDCPTCDG
KRLKREALSVKFAGLDIAEFGDLTALKLRDLLTPVAHGEYGGAAAVPKGHVLGKAARDAA
VERRVAAGGSAHKAAPDVRRTPNLSDEKRVAAQRLACELIERLEPLIDLGLGYISLDRST
PTLSSGELQRLRLATQLSSQLFGVVYVLDEPSAGLHPADGEALITILERLKAAGNSLFVV
EHDLDVIRRAEWLVDVGPGAGAKGGEVLYSGPIGGLADVETSITRRYLFADPLRSERTPR
DPKAWLRLEGIRRNNLHGLDVAFPIGCFTAVTGVSGSGKSSLVSQALPELVTEHLGGSPV
AEEEDVDPLLDVAQNDTEGRIVAGMEHVRRLVRVDQKPIGRTPRSNLATYSGMFDHVRRI
FADTPLARRRHYSPGRFSFNVAQGRCPVCEGEGYVMVELLFLPSVFAPCSTCHGSRYNPQ
TLEVEWNGRNIAQVLELTVDDACDFFAGEASVMRSLDVLREIGLGYLRLGQPATELSGGE
AQRIKLATELQRAQRGNTIYILDEPTSGLHPSDSDRLMQHLQGLVDAGNTVVVVEHDMRA
ITQVDWIIDLGPGAGEDGGRIVASGVPDVVAEAEGSLTARYLKAAL |
NT seq |
2661 nt +upstreamnt +downstreamnt
atgaagagcaaggatattcacgcgacgacgccggccaccgatcatggtcatacggggccg
ccctcttgcgtgcaggttcgcggcgcgcgccagaataacctcaagaatattgacgtcgat
gtaccgcgcgacgccttcgtggtattcaccggcatatcgggctcgggcaagtcatcgctc
gcgttcggcaccctctatgccgaagcccagcggcgttatctggagtcggttgcgccctat
gcccgtcgcctgatcgaccaggccggggttccggaggtcgacgcgatcgacggtttgccg
cctgcggtcgcgttgcagcagcagcgcggctcggccaacgcgcgatcctcggtcggcagc
gtgactacgctctccagcctggtgcggatgctctattcgcgcgtcggcgaatatccgcgc
catcaatccatgctctatgcggaggatttctcccccaacacggtcgccggcgcctgcccg
acctgtcacggcatcgggcgcgtctatgacgcgaccgaagaaacgatggtgcctgacgac
agcctcaccattcgcgaccgggcgatcgccgcctggccgaccgcctggcatggccagaac
ctgcgcgatatcctcgtttcgctcggctatgacgtcgatacgccgtggcgagacctgccg
aaaaaggatcgcgactggatcctcttcactgaagaggcgccgacggtgccggtctatgcg
ggcctgacgcccgaacagacgcggacggcgctcaagggcggcatggagccgagctaccag
ggcaccttcaccggcgcgcgccgctatgtgctggaaaccttcgccaacactaaaagcgcg
ctgatgaagaagcgcgtctcgcaatatatcatcggacgcgattgcccgacctgcgacggc
aagcgcctgaagcgcgaagccctgtccgtgaagttcgcgggccttgacatcgccgagttc
ggcgacctgacggcgttgaaactccgggacttgctcacgcccgtcgcgcatggcgaatac
gggggcgccgcggcggtcccgaagggccatgtcctcggcaaggcggcccgcgatgcggcg
gtcgaacggcgagtcgcggcaggaggttcggcgcacaaggctgcgcccgacgtgcgccgc
acgcccaacctttccgatgaaaagcgggtcgccgcccaacgccttgcctgcgaattgatc
gaacggctagagccgctgatcgatcttggccttggctatatttcgctcgaccgcagcacg
ccgacgctctcctccggagagctgcagcgcttgcggcttgccacgcaattgtcgtcacag
ctttttggcgtggtctatgtgcttgacgagccttcggcagggttgcacccggcagatggc
gaagccttgatcaccatccttgagcgtctcaaggcggcgggcaactccctgttcgtcgtc
gaacatgatctcgacgtgatccgccgcgcggaatggctcgtcgatgtcgggccaggagcc
ggggcaaagggcggtgaagtcctctacagcgggccgattggagggcttgccgacgtcgag
acttcgatcacccgccgctacctgttcgcagatccgctccgcagtgagcgcacaccgcgc
gaccccaaggcatggctacgcctggaagggatcaggcgtaacaatctccatggtctcgac
gtcgcgtttcccatcggctgcttcaccgctgtcaccggcgtttcgggatcgggcaaatcc
agtcttgtcagtcaggcgctgcccgagctcgtcacggaacacctcggcggctcccccgtg
gccgaggaggaggatgtcgatccgctgctcgatgttgcgcagaacgacaccgaaggacgc
attgtcgcaggcatggagcatgttcgtaggctggtgcgggtcgatcagaaaccgatcggc
cgcacgccgcgctcgaacctagccacctacagcggcatgttcgaccatgtgcgacggatc
ttcgctgatacgccgctcgcccgccggcggcactacagcccgggaaggttctcgttcaac
gtcgcgcaaggccgctgccctgtgtgcgagggcgagggatacgtcatggtggagctgctg
ttcctgccgagcgtttttgccccgtgctcgacctgtcatggctctcgctacaacccgcaa
acgctcgaagtcgaatggaacgggcgcaatatcgcccaggtgctcgaactgacggtcgac
gatgcgtgcgatttcttcgctggcgaggcatctgtgatgcgctccctcgatgtgttgcgg
gagatcggtcttggctatctgaggctcggtcagccggcgaccgagctgtctgggggggag
gcgcagcgcatcaagctggcgactgaactgcaacgcgctcaacgcggcaacaccatctac
atcctcgacgagccgacttcggggcttcatccctccgacagcgaccggctgatgcaacac
ctgcagggcctcgtagacgccggcaataccgtcgtggtcgtcgaacatgacatgcgcgcc
atcacacaggtggactggatcatcgacctgggaccgggggccggggaagatgggggccgt
atcgttgccagcggcgtccctgacgtcgttgcggaagcggaaggcagtctcaccgcccgc
tatctcaaggcggcgctgtag |