Qipengyuania spongiae: L1F33_01840
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Entry
L1F33_01840 CDS
T08950
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
L1F33_01840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsp03019
]
L1F33_01840
03009 Ribosome biogenesis [BR:
qsp03009
]
L1F33_01840
04131 Membrane trafficking [BR:
qsp04131
]
L1F33_01840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qsp04147
]
L1F33_01840
Messenger RNA biogenesis [BR:
qsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
L1F33_01840
Ribosome biogenesis [BR:
qsp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
L1F33_01840
Membrane trafficking [BR:
qsp04131
]
SNARE
SNARE associated proteins
Others
L1F33_01840
Autophagy
Aggrephagy
Other aggrephagy associated proteins
L1F33_01840
Exosome [BR:
qsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L1F33_01840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_2
AAA_22
TIP49
AAA_33
AAA_14
IstB_IS21
AAA_7
RNA_helicase
nSTAND3
NACHT
AAA_17
AAA_28
NPHP3_N
AAA_18
Mg_chelatase
AAA_3
AAA_11
Parvo_NS1
AAA_24
ABC_tran
Sigma54_activat
AAA_19
TsaE
Vps4_C
DUF815
AAA_30
Zeta_toxin
Bac_DnaA
NB-ARC
AAA_lid_PRS2_C
SLFN-g3_helicase
PhoH
ATPase
Viral_helicase1
ATP-synt_ab
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
UVI39729
LinkDB
All DBs
Position
complement(360284..362608)
Genome browser
AA seq
774 aa
AA seq
DB search
MADADAAIEKNTVRLQVAAARQEESGQGIARLPRSAFQKLGVTEGDVVEIIGKRSTVAIA
MPAYDEDQSLDVVRLDGLQRNNAECGSGEHVQIAAAESRPATRVVFAPASREMRLQGPSQ
ALKRNFFRKPIVAGDLVATTGQQPVQNMPPEVRRMFNAPAYALTQIRLNVVSTSPKGIVH
IDENTEVELRSEFEESTPGGRATVNYDDVGGMGETIQQLREMVELPLRYPELFTRLGVDP
PKGVLLHGPPGTGKTRLAQAVANESDANFSIINGPEIMGSGYGESEKRLREVFEEASKNA
PAIVFIDEIDSIAPKRDQVPGEAEKRLVAQLLTLMDGLEARANVVVIAATNRPEAIDEAL
RRPGRFDREIVIGVPDEKGRREIIGIHTRGMPLGDKVDLDELARTTYGFVGADLAALARE
AAIDAVRRIMPRLDLDEREIPAEVLDDLYVSREDFLTALKRVQPSAMREVMVQVPNVAWQ
DIGGVGDAIGKLKEGIELPMKNPEAFRRLGIRAAKGFLLYGPPGTGKTLLAKAVAKEAEA
NFISMKSSDLLSKWYGESEQQIAKMFRRARSVAPCVVFIDEIDSLVPARGSGQGEPQVTG
RVVNTILAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELVYVGTPDKAGREQILG
IHTEGMPLAEDVSLGRIADQTDRFTGADLEDVVRRAGLNALQRAGGDVENVTAADFDEAL
KDSRATVTQKMEEEYKKMRGELKKRAAEAMPIGFIHEGMVESTRERKHGGVSDL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgctgacgctgcgatcgaaaagaacaccgtgagactacaggtagccgcggcg
cgccaagaagaatcgggacaaggcatcgcccgcctgccgcgttcggcttttcagaaactc
ggcgtgaccgaaggcgacgtggtcgagatcatcggcaagcgttcgaccgtggccattgcc
atgccggcctatgacgaggatcagtcgctcgacgtggtgcgactcgatggattgcagcgc
aacaatgccgaatgcggttcgggcgagcatgtccagatcgccgcggccgaatcgcggcca
gcgacgcgtgtggttttcgcaccggccagccgcgagatgcgattgcagggcccctcgcag
gcactgaagcgcaatttcttccgcaagccgatcgttgcgggcgatctcgtcgccacgacg
gggcagcagccggtgcagaacatgccgcccgaagtgcgccggatgttcaacgcacccgcc
tatgcactgacccagatccggctgaacgtcgtatctaccagccccaagggcatcgtccac
atcgacgagaacaccgaggtggaactgcgttccgaattcgaggaatcgactcccggcggc
cgcgccacggtcaattacgacgatgtcggtggcatgggcgagacgatccagcaactgcgc
gagatggtcgaactgccgctgcgctaccccgagctgttcacccgcctcggcgtcgatccc
cccaagggcgtgctgctccacggcccgcccggcaccggcaagacccgcctggcgcaggcg
gtggcgaacgagagcgatgcgaatttctcgatcatcaacgggccggagatcatgggctcg
ggctatggcgagagcgagaagcgcctgcgcgaagtgttcgaggaggcgagcaagaacgcg
cccgccatcgttttcatcgacgagatcgattcgatcgctcccaagcgcgaccaggtgccg
ggcgaggccgagaagcggctggtcgcccagctgctgacgctgatggacgggctggaagcg
cgcgccaatgtcgtggtgatcgcggcgaccaaccggccggaggcgatcgacgaggcgctg
cgccgtccgggccgcttcgaccgcgagatcgtgatcggcgtgccggacgagaagggccga
cgcgagatcatcggcatccacacacgcggcatgccgctgggcgacaaggtcgatctcgac
gaactggcgcgcaccacttacggcttcgtcggcgcggaccttgccgctctggcgcgcgag
gcggcgatcgacgcggtgcggcggatcatgccgcgcctcgatctggacgagcgggaaatc
cctgccgaagtgctcgacgatctctatgtcagtcgcgaggattttctgacggcgctgaag
cgcgtgcagccttcggccatgcgcgaggtgatggtccaggtgcccaatgtcgcctggcag
gacatcggcggggtcggcgacgcgatcggcaagctcaaggaaggcatcgagctgccgatg
aagaatcccgaggcgttccgccgtctcggtatccgggccgccaagggcttcctgctctac
ggcccgcccggcactggcaagaccctgctcgccaaggccgtggccaaggaagcggaggcc
aatttcatctcgatgaaaagctccgacctcctcagcaagtggtatggcgagagcgagcag
cagatcgccaagatgttccgccgcgcgcgttcggtcgcgccctgcgtcgtcttcatcgac
gagatcgacagcctagtgcccgcgcgcggttcggggcagggcgagccgcaggtgacgggg
cgggtggtcaataccatcctcgccgaaatggacgggctcgaggaattgcagtcggtggtc
gtgatcggcgcgaccaatcgcccgacgctggtcgaccccgcgttgttgcggcccggccgg
ttcgacgagctggtctatgtcggcacgcccgacaaggccgggcgcgagcagatcctcggc
atccataccgaggggatgccgctggccgaagacgtttcgctgggtcggatcgcggaccag
accgaccgcttcaccggcgccgatctggaggacgtcgtccgccgcgccggcctcaacgcg
ctgcaacgcgcgggcggggatgtcgagaacgtgaccgccgccgacttcgacgaggcgctc
aaggattcccgcgcgaccgtcacgcagaagatggaagaggaatacaagaagatgcgcggc
gagctgaagaagcgcgcggccgaggcgatgccgatcggcttcatccacgaaggaatggtg
gagagcacccgcgagcgcaagcacggcggggtgtccgacctctag
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