Qipengyuania spongiae: L1F33_02150
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Entry
L1F33_02150 CDS
T08950
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1F33_02150 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsp03019
]
L1F33_02150 (recQ)
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_02150 (recQ)
Enzymes [BR:
qsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F33_02150 (recQ)
Messenger RNA biogenesis [BR:
qsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1F33_02150 (recQ)
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1F33_02150 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
UVI39787
UniProt:
A0ABY5SZ43
LinkDB
All DBs
Position
complement(432924..434720)
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AA seq
598 aa
AA seq
DB search
MTDTVEIEDELAPARETLRRVFGFDGFRGRQSDVVSRTLAGRSTLAVMPTGAGKSLTYQL
PAVMLDGCCVVVSPLIALMHDQLRAARANGIRAATLTSVDEDWRETIAAFRAGELDLLYV
APERASQPGFRDLLSSAPLALFAVDEAHCVSEWGHDFRPDYRQLRPLMDAFPAVPRLALT
ATADAQTRADVMAQLGIPEDGLVLAGFDRPNIRYAMRHRDNPVRQIAALMAEQPGPGIVY
APTRRKVEDLAEKLAAATGREVRAYHAGLDPAMRAANQQAFVASEDMVVVATIAFGMGID
KPDVRFVAHAGIPKSIEAYYQETGRAGRDGDPALTTMFWGAGDFATARQRLGELPTDRQA
SERARLDALAGLVETAECRRAVLLRHFGEDPPETCGNCDNCLERPGVTDVTQLARKLLSA
VYRTGQSFGFGHVQKVLTGARDERVEQRGHDRLSVFGIVEDKEAGLLRPLSRALQARGAL
VATEHGGLALGGDAREIITGEKPVEIVVPPERERGGRRSRDSAPNPVGDPLFEALREVRR
ELAQEAGVPPYVVFHDSTLREMTQERPATLAALGAIGGVGAKKLEAYGARFLKAIADN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacactgtcgaaatcgaggacgaactcgccccggcgcgcgagaccctgcgccgc
gtgttcggcttcgacgggtttcgcgggcgccaaagcgatgtggtctcgcgcacccttgcc
ggacgatccacgctggcggtgatgccgaccggcgcgggcaagtcgctgacctaccagctt
cccgcggtgatgctggacgggtgctgcgtggtcgtcagcccgttgatcgcgctgatgcac
gaccagttgcgcgcagcgcgggccaacggcattcgcgccgccaccctcaccagcgtcgac
gaggactggcgcgagaccatcgccgctttccgcgcgggcgagctcgacctgctctacgtc
gcgcccgaacgcgccagccagccgggtttccgcgatttgctctccagcgctccgctggcg
ctgttcgcggtggatgaggcgcattgcgtgtccgaatggggccacgatttccgtcctgac
taccgccagctgcgcccactgatggacgcctttccggccgtgccccgcctcgcgctgacc
gccaccgccgacgcgcagacccgcgccgacgtgatggcccagctcggcattcctgaggac
gggctggtgctcgccggcttcgaccggccgaacatccgctacgccatgcgccatcgcgac
aatccggtgcgccagatcgccgcgctgatggccgagcagcccggccccggcatcgtctat
gcgccgacccgccgcaaggtggaggacctcgccgaaaagctcgccgccgcgaccggacgg
gaggtgcgcgcctatcacgccgggctcgatcctgcgatgcgcgcggcgaaccagcaggcc
ttcgtggcaagcgaagacatggtggtcgtcgccacgatcgctttcggcatggggatcgac
aagccggacgtgcgcttcgtcgcccatgcgggtatcccgaaatcgatcgaggcctattat
caggaaaccggccgcgccggccgcgacggggacccggcgctgacgacgatgttctggggc
gccggcgatttcgccaccgcacgccagcggctgggcgaactgcctacggaccggcaggcg
agcgagcgcgcccggctcgacgcgctggcgggactggtggagaccgccgaatgtcgccgc
gcggtgctgttgcgccatttcggggaggacccgccggagacttgcggcaattgcgacaat
tgcctcgagcggcccggcgtgaccgacgtcacccagcttgcgcgcaagctcctctcggcg
gtttaccgcaccgggcagagcttcggcttcggccatgtccagaaggtgctgaccggcgcg
cgggacgagcgggtcgagcagcgcgggcacgaccgcctgtcggtgttcggcatcgtcgag
gacaaggaggcggggctgttgcgtccgctctcgcgcgcattgcaggcgcgcggcgcgctg
gtcgcgaccgagcatggcgggctggcgctcggcggggacgcacgggagatcatcaccggc
gagaagccggtggagatcgtcgttccgccggaacgcgagcggggcggacggcgttcgcgc
gattcggcgcccaatccggtcggcgacccgctgttcgaggcactgcgcgaggtgcggcgc
gaactggcgcaggaagcgggcgtgccgccctatgtggtgttccacgattcgaccttgcgc
gaaatgacgcaggagcgccccgccacgctcgcggccttaggggcgatcggcggtgtcgga
gcgaagaagctcgaggcctacggcgcgcggttcctgaaggcgatcgccgacaactga
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