Entry |
|
Symbol |
recQ
|
Name |
(GenBank) DNA helicase RecQ
|
KO |
|
Organism |
qsp Qipengyuania spongiae
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:qsp00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1F33_02150 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:qsp03019]
L1F33_02150 (recQ)
03400 DNA repair and recombination proteins [BR:qsp03400]
L1F33_02150 (recQ)
Enzymes [BR:qsp01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F33_02150 (recQ)
Messenger RNA biogenesis [BR:qsp03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1F33_02150 (recQ)
DNA repair and recombination proteins [BR:qsp03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1F33_02150 (recQ)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(432924..434720)
|
AA seq |
598 aa
MTDTVEIEDELAPARETLRRVFGFDGFRGRQSDVVSRTLAGRSTLAVMPTGAGKSLTYQL
PAVMLDGCCVVVSPLIALMHDQLRAARANGIRAATLTSVDEDWRETIAAFRAGELDLLYV
APERASQPGFRDLLSSAPLALFAVDEAHCVSEWGHDFRPDYRQLRPLMDAFPAVPRLALT
ATADAQTRADVMAQLGIPEDGLVLAGFDRPNIRYAMRHRDNPVRQIAALMAEQPGPGIVY
APTRRKVEDLAEKLAAATGREVRAYHAGLDPAMRAANQQAFVASEDMVVVATIAFGMGID
KPDVRFVAHAGIPKSIEAYYQETGRAGRDGDPALTTMFWGAGDFATARQRLGELPTDRQA
SERARLDALAGLVETAECRRAVLLRHFGEDPPETCGNCDNCLERPGVTDVTQLARKLLSA
VYRTGQSFGFGHVQKVLTGARDERVEQRGHDRLSVFGIVEDKEAGLLRPLSRALQARGAL
VATEHGGLALGGDAREIITGEKPVEIVVPPERERGGRRSRDSAPNPVGDPLFEALREVRR
ELAQEAGVPPYVVFHDSTLREMTQERPATLAALGAIGGVGAKKLEAYGARFLKAIADN |
NT seq |
1797 nt +upstreamnt +downstreamnt
atgaccgacactgtcgaaatcgaggacgaactcgccccggcgcgcgagaccctgcgccgc
gtgttcggcttcgacgggtttcgcgggcgccaaagcgatgtggtctcgcgcacccttgcc
ggacgatccacgctggcggtgatgccgaccggcgcgggcaagtcgctgacctaccagctt
cccgcggtgatgctggacgggtgctgcgtggtcgtcagcccgttgatcgcgctgatgcac
gaccagttgcgcgcagcgcgggccaacggcattcgcgccgccaccctcaccagcgtcgac
gaggactggcgcgagaccatcgccgctttccgcgcgggcgagctcgacctgctctacgtc
gcgcccgaacgcgccagccagccgggtttccgcgatttgctctccagcgctccgctggcg
ctgttcgcggtggatgaggcgcattgcgtgtccgaatggggccacgatttccgtcctgac
taccgccagctgcgcccactgatggacgcctttccggccgtgccccgcctcgcgctgacc
gccaccgccgacgcgcagacccgcgccgacgtgatggcccagctcggcattcctgaggac
gggctggtgctcgccggcttcgaccggccgaacatccgctacgccatgcgccatcgcgac
aatccggtgcgccagatcgccgcgctgatggccgagcagcccggccccggcatcgtctat
gcgccgacccgccgcaaggtggaggacctcgccgaaaagctcgccgccgcgaccggacgg
gaggtgcgcgcctatcacgccgggctcgatcctgcgatgcgcgcggcgaaccagcaggcc
ttcgtggcaagcgaagacatggtggtcgtcgccacgatcgctttcggcatggggatcgac
aagccggacgtgcgcttcgtcgcccatgcgggtatcccgaaatcgatcgaggcctattat
caggaaaccggccgcgccggccgcgacggggacccggcgctgacgacgatgttctggggc
gccggcgatttcgccaccgcacgccagcggctgggcgaactgcctacggaccggcaggcg
agcgagcgcgcccggctcgacgcgctggcgggactggtggagaccgccgaatgtcgccgc
gcggtgctgttgcgccatttcggggaggacccgccggagacttgcggcaattgcgacaat
tgcctcgagcggcccggcgtgaccgacgtcacccagcttgcgcgcaagctcctctcggcg
gtttaccgcaccgggcagagcttcggcttcggccatgtccagaaggtgctgaccggcgcg
cgggacgagcgggtcgagcagcgcgggcacgaccgcctgtcggtgttcggcatcgtcgag
gacaaggaggcggggctgttgcgtccgctctcgcgcgcattgcaggcgcgcggcgcgctg
gtcgcgaccgagcatggcgggctggcgctcggcggggacgcacgggagatcatcaccggc
gagaagccggtggagatcgtcgttccgccggaacgcgagcggggcggacggcgttcgcgc
gattcggcgcccaatccggtcggcgacccgctgttcgaggcactgcgcgaggtgcggcgc
gaactggcgcaggaagcgggcgtgccgccctatgtggtgttccacgattcgaccttgcgc
gaaatgacgcaggagcgccccgccacgctcgcggccttaggggcgatcggcggtgtcgga
gcgaagaagctcgaggcctacggcgcgcggttcctgaaggcgatcgccgacaactga |