Qipengyuania spongiae: L1F33_02260
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Entry
L1F33_02260 CDS
T08950
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L1F33_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_02260
Enzymes [BR:
qsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
L1F33_02260
DNA repair and recombination proteins [BR:
qsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L1F33_02260
Prokaryotic type
L1F33_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UVI39808
LinkDB
All DBs
Position
complement(460780..461496)
Genome browser
AA seq
238 aa
AA seq
DB search
MTEQIPESWQPILEPVLDSPESRRLGGWLRTEEEEAGKTVYPPRGCRLRALELTPLDEVR
VVILGQDPYHGPGQAMGLSFSVPQGEKVPPSLRNIYKELESDCGIPRPEHGDLTGWARQG
VLLLNNTLTVEAGKAGSHAGQGWDAVTDACVAAVAAQPVPSVFILWGSHAQAKARRIEGL
SDVRDGGKHCVITSPHPSPLSAHRGFFGSRPFSRANAFLNAHGRGRIDWAHTDRALRS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagataccggaaagttggcagcccatcctggaacctgtgctcgacagtccc
gaaagccggcggctgggcggctggctgaggacagaggaggaagaggcgggcaagaccgtc
tatcccccgcgcggctgtcgcttgcgcgctctggaactgactccgctcgacgaggtccgc
gtggtgatcctggggcaggacccgtatcacgggcccggacaggcaatgggcctctccttt
tcggtcccgcagggtgagaaggtgccgccgagcctgcggaacatctacaaggagctcgaa
agcgattgcggcattccgcggcccgagcatggcgacctcaccggatgggcgcgacagggc
gtgctgctgctcaacaacacgctgacagtcgaggcaggcaaagcgggcagccatgcgggg
cagggctgggacgcggtcaccgacgcctgcgtcgcggcggtcgcggcacagcccgtgccc
tcggtcttcatcttgtggggcagccacgcgcaggccaaggccaggcggatcgaagggctg
agcgatgttcgggacggcgggaagcattgcgtcataacgagcccgcacccgagtccgctt
tccgcccatcgcgggttcttcggcagccgccctttcagccgcgccaacgccttcctgaat
gcccatggccggggccggatcgactgggcgcataccgaccgggcgctccgctcatag
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