Qipengyuania spongiae: L1F33_02265
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Entry
L1F33_02265 CDS
T08950
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qsp03016
]
L1F33_02265
Enzymes [BR:
qsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L1F33_02265
Transfer RNA biogenesis [BR:
qsp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L1F33_02265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UVI39809
LinkDB
All DBs
Position
461579..462211
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AA seq
210 aa
AA seq
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MAVYFHEEDLPDGVLAPGDDGGSALAVDTETMGLVTPRDRLCLVQISDGGGDEHLVRFSP
DSNYDAPNLKAVLGDPNRVKLYHFARFDLAAIEYYLGVTAAPVFCTKIASKLTRTYTDRH
GLKNLVEELLGESISKQQQSSDWGGPVLNDAQREYAASDVRYLHRMKTIFEERLAREGRT
EMAQACFDFLPTRARLDIAGWADHDIFSHA
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatattttcacgaagaagacctgcctgatggcgttctcgctcccggtgacgat
gggggaagcgcgcttgccgtcgacaccgagaccatgggtctcgtcactccgcgcgaccgg
ctctgtctggtccagatcagcgatggcgggggggacgagcatctcgtgcgcttcagcccc
gacagcaattacgacgcgcccaatctcaaggcggtgctgggcgatccgaaccgggtcaag
ctctaccatttcgcccgcttcgacctcgccgcgatcgaatattacctcggcgtaaccgcc
gcgccggtgttctgcaccaagatcgcgagcaagctcacccgcacctataccgaccggcat
ggcctcaagaacctcgtcgaggaactgctgggcgaaagcatttccaagcagcagcagtcg
agcgactggggcggccccgttctcaacgacgcgcaacgcgaatatgcggcgagcgacgtg
cgctatctccaccggatgaagacgatcttcgaggaacggctggcgcgcgaggggcggacc
gagatggcgcaggcctgcttcgacttcctgcccacccgcgcccggctcgacatcgccggc
tgggccgaccacgacattttcagccacgcgtaa
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