KEGG   Qipengyuania spongiae: L1F33_03025
Entry
L1F33_03025       CDS       T08950                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
qsp  Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:qsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:qsp03032]
    L1F33_03025
   03036 Chromosome and associated proteins [BR:qsp03036]
    L1F33_03025
   03400 DNA repair and recombination proteins [BR:qsp03400]
    L1F33_03025
DNA replication proteins [BR:qsp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    L1F33_03025
Chromosome and associated proteins [BR:qsp03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    L1F33_03025
DNA repair and recombination proteins [BR:qsp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      L1F33_03025
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: UVI39949
LinkDB
Position
complement(610364..610633)
AA seq 89 aa
MNMSELIKTVAKEADLSEAKTKDVLMSAFDAIGDAASKGDDIAIPGFGKFSVKDRPERQG
RNPATGEAMTIKASRSVGFKPAKGLKDKM
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaacatgagcgaacttatcaagaccgtcgccaaggaggcggacctttccgaggcgaag
accaaggatgtcctcatgtccgcgttcgacgcgatcggcgatgccgcctcaaagggcgac
gacatcgccattcccggcttcggcaagttctcggtcaaggatcggccggagcggcagggc
cgcaacccggccacgggcgaggcgatgacgatcaaggcgtcgcgcagcgtcggcttcaag
cccgcgaagggtctcaaggacaagatgtga

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