Qipengyuania spongiae: L1F33_03385
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Entry
L1F33_03385 CDS
T08950
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_03385
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
L1F33_03385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
UVI40014
LinkDB
All DBs
Position
complement(678888..679313)
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AA seq
141 aa
AA seq
DB search
MTDEPVIDPERSRIMRAVGRSRTKPEMVVRRALHAAGYRFVTNYKGLPGSPDIVFTKRRK
VIFVHGCFWHRHPGCRLASTPKTRTEFWTAKFDANVERDQAAEAALEAAGWKVFTIWECE
TRSFESVFDSLTKFLGSPRYA
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgaaccggtcatcgaccccgagcgatcgcgcatcatgcgggccgtggggaga
agtcgaaccaagcccgagatggtcgttcgaagggcgctccatgctgcgggctatcggttc
gtgaccaattacaaaggacttcccggctcgccggacatagttttcacgaaacgtcgaaag
gtgatcttcgtccacggttgcttctggcatcggcatcctggatgtcgactggcaagcaca
cccaagacgaggacggaattctggaccgcgaagttcgacgcgaacgtcgagcgcgaccaa
gccgccgaggccgctttagaagccgcaggctggaaggttttcacgatctgggaatgcgaa
acacggtcttttgaaagcgtcttcgatagcttgactaagtttctaggttctccgcgatat
gcttaa
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