Qipengyuania spongiae: L1F33_04385
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Entry
L1F33_04385 CDS
T08950
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsp03021
]
L1F33_04385
Transcription machinery [BR:
qsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L1F33_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
KORA
HTH_Tnp_ISL3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UVI40189
LinkDB
All DBs
Position
878098..878658
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AA seq
186 aa
AA seq
DB search
MSGAGDNPDEALVSQVRAGNKRAFSKLVEHETGRLLALATRMLSSPSQAEDVVQDSLASV
WLTRHRLDPDKPIGPYLTTVVLNRCRDRLRRRKVAGFFGLSGDDELHSIADDLPGPEALA
VSREELNLVQAEIARMPLRLREALVLVTIEGRSQAEAADLLGTTEKAIETRVYRARNRLK
ERFEKL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggcgggcgacaatccggatgaggcccttgtctcgcaggtgagggccggtaac
aagcgggctttcagcaagctcgtcgagcatgaaaccggtcggcttctcgcgctcgcgaca
cgcatgctttcctctccttctcaggcggaggacgttgttcaggacagcctcgcttcggtg
tggctgacgcgccatcggctcgatccggacaagccgatcggaccctatctgacaaccgtc
gtcctcaaccgctgccgggaccgtttgcgcaggcgcaaggtcgcaggctttttcggactg
tcgggtgatgacgaactccattccatcgccgacgatttgccgggtcctgaagcgttggcc
gtttccagggaagagctcaatctcgttcaggccgagatcgcgcgaatgcctttaaggctg
cgcgaagcgcttgtgctcgtgaccatcgaggggcgtagccaggccgaggcggccgatctt
ctcggaacgaccgaaaaggcgatcgaaacccgcgtatatcgcgcgcgcaacaggctgaag
gagcgcttcgaaaaactttga
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