Qipengyuania spongiae: L1F33_04595
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Entry
L1F33_04595 CDS
T08950
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsp03032
]
L1F33_04595 (gyrB)
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_04595 (gyrB)
Enzymes [BR:
qsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L1F33_04595 (gyrB)
DNA replication proteins [BR:
qsp03032
]
Prokaryotic type
DNA Topoisomerases
L1F33_04595 (gyrB)
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L1F33_04595 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UVI40227
UniProt:
A0ABY5T0A0
LinkDB
All DBs
Position
complement(910985..913543)
Genome browser
AA seq
852 aa
AA seq
DB search
MDENISETPANGAPDNTRPDNKRRGEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHH
MVFEVSDNAIDEALAGHCDLVLIELNADGSVSVEDNGRGIPVDMHKEEGVSAAEVIMTQL
HAGGKFENTSDDNAYKVSGGLHGVGVSVVNALSEWLELVIWRDGKEHWMRFENGDAVEPL
RVVGDAPPVDSNGDEDGLKKGTRVTFKASEETFKNVIEFDFDKLEHRYRELAFLNSGVRI
KLRDKRHEEPLEHDLFYEGGIAAFVKYLDRNKQPLISDPIAVSAEKDGIGIDVALQWNDS
YYENVLTFTNNIPQRDGGTHLAAFRAALTRTLNNYATASGMMKKEKVSLSGEDMREGLTA
IVSVKLPDPKFSSQTKDKLVSSEVRQPLESLMGEKMGEWLEENPNEAKAIVQKIIDAAAA
REAARRAREMSRKGAMSVASLPGKLADCQDRNPANCELFLVEGDSAGGSAKQGRDRKTQA
ILPLKGKILNVERARFDRIISSKEVGTLIQAMGTGLRDEFNLEKLRYHKIVIMTDADVDG
AHIRTLLLTFFHRQMPEIVKAGHLFIAQPPLFKVSKGRSEVYLKDQAALDRYLVDAGLQG
RTLESAEGSLPERAVRELVDHALRMRNLIAFVPRKYDAAIVEQMALVGALDPALDKDARL
RALELAAKRTQAGDPKARWTARYRDDGSQTVLFERLWRGVTDVYEVEAKFLESAEARKLH
RLASEQAESYNHPARLVKASTEAEPETSAEDGEDAPAASDEDAITRPTQLLTAVLAAGRK
GLSIQRYKGLGEMNAEQLWETTLDPENRALLQVKVEDADVTDEIFTRLMGDVVEPRREFI
QDNALNVANLDV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaacatttccgagacgccggcaaacggcgctcctgacaacacgcggcccgat
aacaagcggcgcggcgaatacggcgcggattcgatcaaggtgctgaaagggctcgacgcg
gtccgcaagcgcccgggcatgtatatcggcgacaccgacgatggcagcggcctgcaccac
atggtgttcgaagtgtccgacaacgccatcgacgaggcgctggcgggccattgcgatctc
gtcctcatcgaactcaatgccgacggatcggtctcggtcgaggacaatggccgcggcatt
ccggtcgacatgcacaaggaagaaggcgtctcggcggccgaggtcatcatgacccagctc
cacgcaggcggcaagttcgagaacaccagcgacgacaatgcctacaaggtatcgggcggc
ctgcacggcgtgggcgtctcggtcgtcaacgcgctgtccgaatggctcgaactggtgatc
tggcgcgacggcaaggagcactggatgcgcttcgagaacggcgatgcggtggaacccttg
cgcgtcgtgggcgatgcgcccccggtcgacagcaatggcgacgaggatggcctgaagaaa
ggcacccgcgtcaccttcaaggccagcgaggagacgttcaagaacgtcatcgaattcgat
ttcgacaagctggagcaccgctatcgcgagctcgccttcctcaattccggcgtgcgcatc
aagctgcgcgacaagcgtcacgaggagccgctggagcacgacctgttctacgagggcggg
atcgccgccttcgtgaagtatctcgaccgcaacaagcagccgctgatctccgacccgatc
gccgtctcggccgaaaaggacgggatcgggatcgacgtcgcgctgcagtggaacgacagc
tattacgagaacgtcctcaccttcaccaacaacatcccgcagcgcgacggcggcacgcat
ctcgcagccttccgcgccgcgctgacccgcacgctcaacaattacgcgaccgcctccggc
atgatgaagaaggagaaggtcagcctgtcgggcgaggacatgcgcgagggcctgacggcg
atcgtttcggtcaagctgcccgatcccaaattctccagccagaccaaggacaagctggtc
agctccgaagtccgccagccgctcgaaagcctgatgggcgagaagatgggcgaatggctg
gaggagaatcccaacgaagccaaggcgatcgtccagaagatcatcgacgccgccgccgcc
cgcgaagccgcgcggcgcgcccgcgagatgagccgcaagggcgcgatgagcgtcgcctcg
cttcccggcaagctcgccgactgccaggatcgcaatcccgcgaattgcgagctcttcctg
gtcgagggcgattcggccggcggttccgccaagcagggccgcgatcgcaagacgcaggcg
atcctgccgctcaagggcaagatcctcaatgtcgagcgcgcccggttcgaccggatcatc
agctccaaggaagtcggcacgctgatccaggccatgggcaccggcctgcgcgacgagttc
aatctcgaaaagctgcgctatcacaagatcgtgatcatgaccgacgccgatgtcgacggc
gcgcatatccgcacgctgctgctcactttcttccaccggcagatgcccgagatcgtgaag
gcggggcacctgttcatcgcccagccgccgctgttcaaggtgagcaagggccgcagcgaa
gtctatctgaaggatcaggccgcgctcgaccgttatctggtcgatgccggattgcagggc
cgcacgctggaaagcgccgaaggcagcctgcccgagcgcgccgtgcgcgagctggtcgac
catgctctgcgaatgcgcaacctgatcgccttcgtgccgcgcaaatacgatgctgcgatc
gtcgaacagatggcgctggtcggcgcgctcgatcccgcgctggacaaagatgcgcggttg
cgggcgctcgaactcgccgcgaaacggacgcaggcaggcgatcccaaggcacgctggacg
gcgcgttatcgcgacgacggttcgcagaccgtgctgttcgagcggctgtggcgcggcgtg
accgacgtctacgaggtcgaggcgaagttcctcgaaagcgccgaggcaaggaagctccac
cgtctcgccagcgagcaggccgaaagctacaaccatcccgcccgtctggtgaaggcgtcc
accgaggccgagcccgagacatctgccgaggatggcgaggacgcccccgcggcgagcgac
gaggatgccatcacccggccgacccagcttctcaccgcggtgctcgcggcgggccgcaag
ggcctctcgatccagcggtacaagggccttggcgagatgaacgccgagcagctctgggaa
acgacgctcgatcccgaaaaccgcgccctgcttcaggtcaaggtcgaggatgccgacgtg
accgacgagatcttcacccgcctgatgggcgacgtggtcgagccgcgccgagaattcatt
caggacaatgcgctcaacgtggccaatctcgatgtctga
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