Qipengyuania spongiae: L1F33_07315
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Entry
L1F33_07315 CDS
T08950
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L1F33_07315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_07315
Enzymes [BR:
qsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F33_07315
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L1F33_07315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
Zot
YlxR
MerR_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UVI38087
LinkDB
All DBs
Position
complement(1475488..1477653)
Genome browser
AA seq
721 aa
AA seq
DB search
MNRVRCLVLNAALGPLDYRVPEGMAVEAGSVVECPLGPRTVIGIIWEAERLPGAEVPAEK
LRPLRGILPVPPLPAPLRRLMEWTADYYVAPLASVARMALSSGGALRGPATMIEYRLTGG
MPERMTPQRQAAMEALEHEQATIRELAGIAGVSEGVLRGLVNQGVLEPVEVDCDRPYDRA
LPDFARITLNPDQEGAAELFRAAVRARAFAPFLLDGVTGSGKTETYFEPMAEAIRDGRQV
LVLLPEIALTEAFLARFAARFGTAPVLWHSSLKSTERRRAWRSIACGDAQVVVGARSALF
LPFPRLGLIVIDEAHEVSFKQDDGVRYNARDVAVMRAHFEHVPVILASATPALESLAMAE
NGTYAKIDLPSRYGAAELPAIRTIDLTQEKPGRGAWLAEPLVAALEERLDRGEQSLLFLN
RRGYAPLTLCRNCGFRFQCPNCSAWLVEHRFSQRLACHHCGHETPPPATCPECGEPDCLV
ACGPGVERIADEVAELLPDARTFVATSDTLNSPGRAAEFVAMVEGGAVDIIIGTQLVTKG
FHFPDLTLVGVVDADLGLEGGDLRAAERTYQQIAQVAGRAGRGDKPGEVLLQTRHPDAPV
IAALADGDREAFYEAETDARRFAGAPPFGRWAAIIVSSEEEDEARDAAQRIGRARPDMEE
LAIYGPAPAPLSLLRGRYRYRLLINARRSAQLQDIIRQWLGALDHPAGVRVAVDIDPYSF
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgtgcgctgcctcgtcctcaatgccgctctcggcccgctcgactatcgcgtt
ccggaagggatggcggtcgaggcggggtcggtggtcgagtgcccgctggggccccgcacg
gtaatcgggatcatctgggaggccgaacggctgcccggtgccgaggttccggcggaaaag
ctgcggcccctgcgcggcattctgccggtgccgccgctgcccgctccgctgcggcggctg
atggagtggacagcggactactatgtcgcgccgctggccagcgtcgcgcgcatggcgctg
tcctccggcggcgcgctgcgcggtccggcgacgatgatcgaataccggctgaccggcgga
atgccggagcggatgactccgcaacgccaggccgcaatggaggcgctggagcacgagcag
gccaccatccgcgagttggccgggatcgccggggtttccgaaggcgtgctgcgcggcctc
gtcaatcagggggtgttggaaccggtcgaggtcgattgcgaccgcccctatgaccgcgcc
ctgcccgatttcgcgcggatcacgctcaatcccgatcaggagggggcggcggagctgttc
cgcgccgccgtgcgcgcgcgggccttcgcgcctttcctgctcgacggggtgaccggatcg
ggcaagaccgaaacctatttcgaaccgatggccgaggcgatccgcgacggccggcaggtg
ctggtcctgctgccggagatcgcgctcacggaagctttcctcgcccgcttcgcagcccgc
ttcggcaccgcgcccgtcctctggcactccagcctcaaatcaaccgagcgacgccgtgcc
tggcggtccatcgcttgcggtgacgcgcaggtggtggtcggcgcccgctcggccctgttc
ctgcccttccccaggctcggcctgatcgtgatcgacgaggcgcacgaggtcagtttcaag
caggatgacggggtgcgctacaatgcccgcgacgtcgccgtgatgcgcgcccatttcgag
cacgtgccggtgatcctcgccagcgccacgcccgcgctcgagagcctcgccatggccgag
aacgggacctatgcgaagatcgacctgccgagccgctatggcgcggcggagctgcccgcg
atccgcaccatcgacctgacgcaggagaagccgggccgcggcgcgtggctggccgaaccg
ctggtcgcggcgctggaggaacggctcgaccgaggcgagcagtcgctcctgttcctcaac
cgacgcggctatgccccgctgacgctctgccgcaattgcggcttccgcttccagtgcccg
aactgttcggcctggctggtcgagcatcgcttctcgcagcgtctcgcctgccatcattgc
gggcacgagaccccgccgcccgcaacctgtcccgaatgcggcgagcccgactgcctcgtc
gcctgcgggcctggggtcgagcggatcgcggacgaggttgccgagctcctgcccgacgcg
cggaccttcgtcgccacatcggacacgctgaattcgcccgggcgggcggcggaattcgtc
gcgatggtggaaggcggcgcggtcgatatcatcatcggcacgcagctcgtcaccaagggg
ttccacttccccgaccttacgctggtcggcgtggtcgatgccgatctcggccttgagggt
ggcgacctccgcgcggccgagcgcacctatcagcagatcgcgcaggtcgccggccgtgcg
ggccggggcgacaagccgggcgaggtgctgctccagacccgccaccccgacgcgccggtg
atcgccgcgctggccgacggcgaccgcgaggccttctacgaggccgaaaccgatgcgcgc
cgcttcgccggtgccccgcccttcggccgctgggccgcgatcatcgtctccagcgaggaa
gaggacgaggcgcgcgacgccgcccagcgcatcggccgcgcgcgcccggacatggaggaa
ctggcgatctacggccccgccccggccccgctgagcctgctgcggggccgctaccgctac
cgcctgctcatcaacgcccgccgcagcgcgcaattgcaggacatcatccgccaatggctc
ggcgctctcgaccatcccgccggcgtgcgcgtggcagtggatatcgatccctacagtttc
gtgtga
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