Qipengyuania spongiae: L1F33_07940
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Entry
L1F33_07940 CDS
T08950
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L1F33_07940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsp03021
]
L1F33_07940
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_07940
Enzymes [BR:
qsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L1F33_07940
Transcription machinery [BR:
qsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L1F33_07940
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L1F33_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
UVI38208
LinkDB
All DBs
Position
1585653..1586708
Genome browser
AA seq
351 aa
AA seq
DB search
MSVNTKNWQELKKPNTLEIKDGGDKKRKTTFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGTGLKRLQLSATGPGEVKAGDI
ATSGDIEVMNKDLVICHLDEGATLNMELTADVGKGYIPAVQNRPADAPIGLIPVDSLYSP
VRQVSYKVENARVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLTLFVHFEDGIP
QPSSAMIGQAAEPQESDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaacaccaagaactggcaggaactcaagaaacccaacactctcgaaatcaag
gatggcggcgacaagaagcgcaagaccaccttcgtcgcggaacccctcgagcgtggtttc
ggcctgacgctcggcaatgcgctgcgtcgcgtgctgctctccagtcttcagggcgccgcg
atcacctcgatcaagatcgagaacgtgctgcacgagttctccagtcttgccggcgtgcgc
gaagatgtgaccgacatcgtcctcaacgtgaagcagatcgcgttgaagatggaaggcacg
ggcctcaagcgcctgcagctttcggccaccggtccgggagaggtcaaggccggcgacatc
gccacgtcgggcgacatcgaggtgatgaacaaggatctcgtgatctgccacctcgacgag
ggcgcgacgctcaacatggagctgaccgccgatgtgggcaagggctacatccccgccgtc
cagaaccgtccggccgatgcgccgatcggtctgatcccggtggacagcctctattcgccg
gtccgccaggtaagctacaaggtcgagaacgcccgcgtcgggcaggagctcgactacgac
aagctcagcctcacggtcgagaccgacggcacagtcaccccggaagacgccgtggcctat
gccgcgcgcatcctgcaggaccagctgacgctgttcgtccacttcgaggacggcatcccg
cagccttccagcgcgatgatcggccaagccgccgaaccgcaggaaagcgacaccaaccag
ctcaaccgctacctcctcaagaaggtcgacgagctggagctgtcggtgcggtcggccaac
tgcctcaagaacgacaacatcatctatatcggcgatctggtccaaaagaccgaggccgag
atgctccgcacgccgaatttcggccgcaagagcctcaacgagatcaaggaagttctttcc
tccatgggtctgcgcctcggcatggacatcccgggctggccgcccgagaacatcgaggaa
atggccaagaagctcgagcaggaactgctcggctaa
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