Qipengyuania spongiae: L1F33_08120
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Entry
L1F33_08120 CDS
T08950
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
qsp
Qipengyuania spongiae
Pathway
qsp03420
Nucleotide excision repair
qsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L1F33_08120
03430 Mismatch repair
L1F33_08120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsp03400
]
L1F33_08120
Enzymes [BR:
qsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F33_08120
DNA repair and recombination proteins [BR:
qsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1F33_08120
MMR (mismatch excision repair)
Other MMR factors
L1F33_08120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
Cas_Cas4
UvrD_C_2
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
UVI38242
LinkDB
All DBs
Position
complement(1628083..1630965)
Genome browser
AA seq
960 aa
AA seq
DB search
MGANFEQQKVIEALDGPMLIVAGPGSGKTFSLVERTVNLLATRDVQPERVLISTFTEKAA
KELKTRISDRLQRSGAKVNPLDLTVGTLHSIFLDIIDEFRAFSSIRRNFTILDQFDQQYF
VFQRLPEFREIAGLEDFIRPSQNLSSWRIAERLCGYLNKLSEEAVLPEALATATATELQI
LGEAYALYQTLLGQYNYIDFSSIQVEALRLLQLPEVAEQLCDRFDYLMIDEYQDTNTIQE
KIVLKLASRHNNLCVVGDDDQALYRFRGASIRNILEFPSRFPDGTCQQIYLTKNYRSHPD
IVDFYNRWMDLADWQGNDRSYRFPKVIEAAGDDRAKRPVVFKVSGEDGEENWASETVAFL
TKLRGDGIVKDWNQVAFLFRSVRNPKVTQFANDLEVAGIPIYAPRSNMYFERDEIRLMIG
AFMFLFPQYGSIRATREGMQLDVWAYFDRCLGDFIAHLKTGTDEQIAAWAKDKAKQHLIL
SENTNYSFANLFYDLIQFPTFSRFLGEDLAHSGVRDSRPARNLAKLSRLLNKYEYLYNVI
VIQPDRLERDLLTLFNYFLRFLWDGGIEEYEDEAEYAPSGCVSFMTIHQSKGLEFPIVVT
GSLDAVPRRQQSPLDDLLEAEFGDGELFEPLDRIKTFDFWRLFYTAYSRAQNMLVLSCQE
NTPKARGQRNVPSQYFQPVYSPLKSWRELHFDPDSVKLATVKEANLKHSYSFTSDVLIFE
ACPQQYRFFKDLEFAPVRTNAILFGTLVHQTIEDIHKAVLRGDEQKVTTEQIDQWFRSNY
ANISQKERVYLGEPVLRIARRHIATYVDRERSNWHRLREAEVELSLLKDDYVLTGNVDLI
QAEDGAWEIIDFKTEKKPDLIDDAEKLARYRRQLQIYAHLFEEKRGVRVDRMALYYTGEE
AGNPRITFKRETADIEGTIDQVDSVIGKIVSKDYGLRERPEKLCKNCDFRSFCDMTFCGA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtgggagctaatttcgagcaacagaaagtaatcgaagcgctcgacgggcctatgctgatt
gtcgcagggcctggctccgggaagaccttctcgttggtagagagaaccgttaacctgctc
gcgacacgggacgtacaaccggaacgcgtgcttatctcgaccttcaccgagaaggcggcg
aaggagcttaagacccggatctccgatcgtctccaacggtcgggcgcaaaggtcaatccg
ctcgaccttacggtcggcacattgcattcgatcttcctcgacatcattgatgagtttcgc
gctttctcgagcatccgtcgcaacttcacgattctcgaccagttcgatcagcagtatttt
gtctttcagcgtctgcctgaatttcgtgaaattgccgggttggaagatttcattcggcca
tcgcaaaacctgtcgtcatggcgtatcgcagagcggttgtgcggctatttgaacaagctc
tcggaagaagctgtcctgccggaagccctggcaacagcaaccgcgaccgagctgcagatt
cttggcgaggcatatgccctctaccaaacgctgcttggccaatacaattacatcgatttc
tcctcgatccaggtcgaggcgctccgtctattgcagctacctgaggtcgcggagcagctc
tgcgatcgcttcgattatctgatgatcgacgagtaccaagacacgaacacgatccaggaa
aagatcgttctgaagctggcttctcgtcacaacaacctttgcgtcgtcggggatgatgac
caggctctttaccggtttcgtggtgcctcgatccgcaatatccttgaatttccgagccgc
ttccccgatggcacctgccaacagatttacctgaccaagaactaccggtcacacccggat
atcgtcgacttctacaaccgctggatggatcttgctgactggcaagggaacgaccggtcc
taccgcttccctaaggtgatcgaagctgcaggtgatgatcgggccaagcggcctgttgtc
ttcaaggtttccggtgaggatggcgaggagaactgggccagcgaaacagtggcctttctg
acgaaacttcgcggcgacggcatcgtcaaggattggaaccaggtcgctttcctgttcagg
tcggtccgcaatcccaaggtcacgcagttcgccaacgatctcgaggttgcgggcatccct
atctatgcgccgcgctccaacatgtatttcgaacgcgacgagattcgactgatgatcggc
gcgttcatgtttctcttcccacaatacggctcgatccgtgccacgcgggaggggatgcag
cttgatgtctgggcgtactttgatcggtgccttggggatttcattgcccatctcaagacc
gggaccgacgagcagattgcggcatgggcaaaggacaaggcgaagcagcacctcatactg
tccgagaataccaactactcgttcgccaacctcttttacgacctgatccagtttccgact
ttcagccgtttccttggcgaggacctcgcccattccggggtcagggacagtcgtccggcg
cgcaacctagccaagctttcgcggctgctgaacaagtacgaatacctctacaacgtcatc
gtcattcagccggatcggcttgagcgcgacctgctcaccctcttcaattatttcctgcgg
ttcctgtgggacggcgggatcgaggaatatgaggatgaggccgaatatgccccatcgggt
tgcgtatccttcatgacgatccaccagtccaaggggctggagtttccgattgtcgtgacc
ggttcgctcgatgccgtgccgcgtcgtcagcagtcgccactggatgacctgcttgaggcc
gaatttggtgacggcgaactattcgagccgctcgacaggatcaagacgttcgacttctgg
cggctgttctacacggcatattcccgtgcccagaacatgctggtgctaagctgtcaggag
aatacgcccaaggcgcgcgggcagcgcaacgtgccttcgcagtacttccagcctgtctat
tcgccgctcaaaagctggcgcgagttgcattttgaccctgactccgtgaagctggcgaca
gtgaaggaagccaacctcaagcatagctattcctttacgtcggacgtgctgattttcgag
gcctgcccgcagcaataccgctttttcaaggaccttgagttcgccccggtgcggacgaac
gccatcctgttcggcacgctggtccatcagacgattgaggacatccacaaggccgtgttg
cgcggggacgagcagaaggtcaccaccgaacagatcgaccagtggtttcgcagcaactac
gccaacatctcgcagaaggagcgggtctatctgggcgagccggtgctgcgcatcgcacgg
cggcacatcgcgacctatgtcgaccgggagcggagcaactggcaccgcctgcgcgaggcc
gaggtcgaactcagcctgctcaaggacgactatgtcctgaccggcaatgtcgacctgatc
caggccgaggatggggcctgggagatcatcgacttcaagaccgaaaagaagccggacctg
atcgatgatgccgaaaaactggcgcgctataggcggcagttgcagatctatgcccatctg
ttcgaggagaagcgcggcgtccgggtggatcgtatggcgctgtattacaccggcgaggag
gccggaaatccgcggatcaccttcaaacgggagacggcggacatcgagggcacgatcgac
caggtcgattccgttatcggcaaaatcgtatccaaggactatgggttgcgggagcgaccg
gagaagctgtgcaagaactgcgacttccggtcattttgcgacatgacattctgcggcgcg
tga
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